Scophthalmus maximus (turbot): 118309939
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Entry
118309939 CDS
T09850
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118309939 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118309939 (fancd2)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
118309939 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
DDHD
Motif
Other DBs
NCBI-GeneID:
118309939
NCBI-ProteinID:
XP_035488502
LinkDB
All DBs
Position
6:complement(13785850..13801082)
Genome browser
AA seq
1506 aa
AA seq
DB search
MMRKKRRSSVDKGEGATATTKAKKSRGSTRQPKEAVREDTNESVFSVFLRQAGVTLRQGC
TSNEIAVDQVVFQKRIQQQLRKSPKYPGVVQEFITGLESHIEDPESFRNCLLPCVPQLSD
GDASSVSGSFQESLLRMLLGIEMLQTSIINTLLEKLPEFMLDGTGDGGISVPHLIINQLK
WLDRVVDSKELATKLMELVSVAPVDVQQDIITSLPEILEDSQHNDIARELNSLLQTNTQL
TVPILDALSSLNLSSSLLTEVRGAVMSTLAAVQLEDLPVVVKFILHSVSAFDAYEVVNSL
RKKLELEQCVLPPVLQASQSRMRGKGAAMAASTHAAGSSVTLIMDGIKSAVRFQKMISEA
WLKAIESVDEAENHKVIDLLVLFILHCTNPNQSRRGAERILKSKVRTGLIQEALLQKTFR
DYSQVMRGYFASILALAQCLLRSPDPCVVPFGGHMYRLSFTVFDPYCQQEVVGSLVTHVC
SGVGGEVDMALELLCGLVTENPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSRLAFG
QQQQGSHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMIVGSMGAFRPKGKESKNEPLPQE
TFRQVTALLELVRSSSESSPEAGALYYDELANLILSSTLDPQVQEHIAKSVLDDFQDGFV
VDLGLETTCSIPFPARVMYNLEEEDTQDGIAINLLPLLAKDIQNKGEQQCQTKKAHKRVS
PLCLSPFFRLLRLCEEKQHQGDLEEIDALLGCPLILTDMEAVEKMESLSKAEREFLCHLL
FHTINWFREVINAFCRQKETEMKMKVMTRLQNITYLQTLLERALAGTAGYVPPVANFDGE
SSDGATLSSTAPVNKAKKDGSGKKRKTPGKASSESSSQLEEMTEADETQQDQPEKEKEKE
KEKEKEKEKEKEKEIWHGVSLVSYRQFFRELDMEVLSVLQCGLLSRSLLDSELHTKEKEE
VLLGPAELVFLLEDMLRKLEFSLTSAPVKRAPFLKVRTDKSVGFSHLQQRSSKDIAACCV
QLLPALCSHLENCHNHFQTLLSENDGVVDGPATDVQEQHLMSTCYQLLLQVLNTTFSWSG
FNLPGQRSLLKKALGVLAERLNGHSELTLEQLVKHSFEYLLNFGSTMPSLSTALCLSQLL
STVSEKGGNPSTYREQTASLAKRFLSQDWLTARGEKERGNKFNEALHTLLSIYLENVDDV
LKAVEEIAGERIPELLNAAKDESSASWPTLSRQTFLVFYKVMMAELEKAVRKIPASKISD
NVEAQNEKLLTWNLAVRDFHILVNFVKVFDSRPVLNVCLKYGRLFLESFLKLGMPLLDFS
FKRHKEDVQNLLKTIQLSTRQLHHMCGHSKINQDTSLTNHVPALKKSLELFVYRVKATLT
LNNCQEAFWIGNLKNRNLRGEEILSQRTEGSDDDEDDEEQEERHPVLPQEESEDEAQESD
AEEREKIKGKENVDEDCRGGDTSHLTPSLESPCSRVVGTSGTDRVAVRVTRSRTSSSGVC
VSLCFL
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcaaaaaacgacgctcctctgtggataaaggagagggagccactgcgactacg
aaggcaaagaagagtcggggctctactcgccagcccaaagaagcagtgcgagaagacaca
aatgaaagtgtgtttagtgtttttctgagacaggccggtgtcaccctgaggcaaggttgc
acatccaatgagattgcggtcgatcaagtcgttttccaaaaaaggatacagcaacaacta
cggaagagtcccaagtacccgggagttgtacaggaattcataacgggattagagtctcac
attgaggaccctgagagttttcgaaattgcctcctgccatgtgtcccacaattgtcagac
ggagacgccagttctgtctccggctcgttccaggaaagtctgctgcgcatgctgttgggg
attgagatgctgcagacttccatcattaacactttgcttgagaaacttcctgaatttatg
ttggatggcactggagatggaggaatcagtgttccacacttaattattaaccagctcaaa
tggctagacagagtcgtggacagcaaggagctggcaacgaagctcatggagctggtgtca
gtagccccagtggacgttcagcaagacatcatcaccagtctgccggagatattggaagac
tcccagcacaatgacatagccagggagctcaactctttactccagaccaacactcagctg
actgtccccatcctggatgccctctcaagtctgaacctcagttcctcattactgactgag
gttcgtggagcagttatgtccacactggctgctgtgcagctggaagacctgcctgtggtt
gtcaagttcatcctgcactctgtctcagcctttgatgcatatgaggtggtgaatagtctt
cgtaagaagctggagctggagcagtgtgttctccctccagtgctgcaggcctctcagagc
cgcatgaggggcaaaggagcagcaatggccgcttccacacacgcagccggcagcagcgtc
acattgataatggacggcatcaagtccgcagtgagattccagaaaatgatttctgaggct
tggctcaaggcaatagagtctgtggatgaagcagagaaccataaggtcatagatctgctg
gtactcttcatcctccactgcaccaatcccaaccagagccgacggggagccgagaggatt
ctgaagtccaaagtgaggactggactgatccaggaggctctgctgcaaaagaccttcagg
gactattctcaggtcatgcgagggtatttcgcctccattctggctctggctcagtgtctg
ttacgctcccctgacccctgtgtggtgccttttggtggacacatgtaccgactctccttc
actgtgtttgacccttactgccaacaggaggtggtgggctctttagtgacccatgtctgc
agtggtgtgggtggggaggtggacatggctctggagctactctgtggtctggtgacagaa
aacccgtcagaaatggctctgtatgccgtctttgttaagggaattttggactacatggac
aacctcacaccacagcagatccgcagactcttccacctcctgagcagactggcctttggg
caacagcagcaaggatctcacatccaggatgacatgcatattgttatccgtaaacagctc
tccagcactgtgcccaagtacaagcgtatcggcatcattggtgccgtcatgattgtcggc
agcatgggggcctttaggcctaaagggaaggagtcaaagaatgagccgttaccccaggag
acgttcagacaggtgacagccctgctggagcttgtgaggtcgagcagcgagagctccccc
gaggctggagctctgtactacgacgaactggccaatctgatcctgagctctaccctggac
ccacaggtgcaggaacacattgcaaagagtgttctagatgactttcaggatggctttgtg
gtggatctaggcctggaaaccacatgttccatccctttcccggcccgtgtgatgtacaac
ctggaagaggaagatacgcaggatggaatcgccattaacctgctgcctctactggccaaa
gacattcagaacaaaggagagcagcagtgtcaaaccaagaaggcacacaagcgagtgtct
cctctctgtctgtctccgttctttcgcctcctgagactttgtgaggagaagcagcatcag
ggagacctagaggagatcgatgctctgctgggctgcccgctgatcctaacagacatggag
gcagtagagaaaatggagagcctgtccaaagctgagcgggagttcctctgtcatttactc
tttcacaccatcaactggttcagagaggtcataaacgcattttgtaggcaaaaggaaact
gagatgaagatgaaagtgatgactcgtctgcagaacatcacctacctccagactctgttg
gagagggctttggctggaacagctggctatgttccgcctgttgctaactttgatggagaa
agctcagatggagccacattaagttccactgctcctgtgaataaggcaaagaaagatggc
tcaggaaagaagagaaagacccctggtaaggcttcctccgaaagcagctctcaacttgag
gagatgactgaagcagatgaaactcagcaggatcagccagagaaggagaaggagaaggag
aaggaaaaggaaaaggaaaaggaaaaggaaaaggagaaagagatctggcatggagtcagt
ctggtgtcatacagacagtttttccgggagctggacatggaggtgctcagtgtgctgcag
tgcggcctgctgtctcgctcactgttggactctgagctccacaccaaagagaaagaggag
gtcctgctgggtcctgctgagctggtcttcctgctggaggatatgcttcgcaaactggag
ttcagtctcacctctgcccctgtcaagagagcccctttcctcaaggtaaggacggataaa
agtgtgggcttctcccacctacagcagaggagctccaaggatattgctgcctgctgtgtc
cagctgttgccggccctctgctcacacttggagaactgtcacaaccattttcagacgctg
ctgtctgagaacgacggcgttgtagatggacctgcgactgatgtgcaggagcaacacttg
atgtcgacttgctaccagctgctcctgcaggtcctgaacaccaccttcagctggtctgga
ttcaatctgcccggtcagcggagcttactgaagaaagccctgggagttttggctgaacga
ctcaacggacattccgagttgaccctggagcagcttgtaaaacacagcttcgagtacctg
ctgaacttcggcagcaccatgcctagtctcagcacagcgctgtgtctctctcagcttctg
tccactgtgtcggagaagggagggaacccttcgacctacagagagcagaccgcttcccta
gcaaagcgtttcctgagccaggactggttgacggccagaggagagaaggagcgtgggaac
aaattcaatgaagctcttcacactcttctgagcatctacctagaaaatgttgatgatgtt
ctgaaggcagtggaggaaatagctggagaaagaatccctgagctcctcaatgcagcgaaa
gatgagagctctgcatcatggcccactctcagcaggcaaacattcctggtgttctataaa
gtgatgatggcagagctggagaaagccgttaggaaaattcctgcaagcaaaatcagtgac
aacgttgaggctcagaatgagaagctgctgacatggaacctggctgtcagagactttcac
atactggtcaactttgttaaggtgtttgattccaggccagtgctcaatgtgtgcctcaag
tatggtcgccttttcctggagtctttcctgaagttgggaatgccgctactggacttcagt
ttcaaaaggcacaaggaggatgtccagaatctactgaaaaccatccagctcagcaccagg
cagctccatcacatgtgtggacattctaagatcaaccaggacacaagcctgaccaaccac
gtgccggccctgaagaagagcctggagttgtttgtgtacagagtgaaggccacgctcaca
ctcaacaactgtcaggaggcattctggattggcaacctgaagaaccgcaacctgaggggt
gaagagattctttctcagaggacagaaggaagtgatgatgatgaagatgatgaggagcag
gaggagcgacatccagtgctgccccaggaagagtccgaagatgaggcccaagaaagtgac
gctgaggaacgtgagaagattaaaggaaaggaaaatgtggatgaagactgtcgcggcgga
gacacgtctcatttgacgccgtctcttgagtcgccctgctcccgtgtcgttggaacctcc
ggcaccgaccgcgtcgccgtgcgtgtgacccggagcaggacgtcgagctccggcgtatgt
gtctctctttgttttctttag
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integrated database retrieval system
