Scophthalmus maximus (turbot): 118310332
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Entry
118310332 CDS
T09850
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118310332 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118310332 (gtf2b)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
118310332 (gtf2b)
Prokaryotic type
Archaeal type
TFB
118310332 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
118310332
NCBI-ProteinID:
XP_035489056
LinkDB
All DBs
Position
5:complement(13257317..13262824)
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AA seq
318 aa
AA seq
DB search
MASTSRGDALALPRVHCPDHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacgagccgcggagatgctttggcccttcccagagttcactgccccgaccac
cctgatgccatcctggtggaggactacagagcaggagacatgatatgccctgaatgtggc
ctggtagtaggtgaccgtgtaatcgacgtgggctcagagtggcggacgttttctaatgag
aaagcccttaaagatccatccagagtgggagacgcccagaacccgctgctcaatggagga
gacctaaccaccatgatcagcaagggaactggcgcagctagttttgatgagttcggaaac
tcaaagtaccagaaccggagaaccatgagcagctccgaccgagccatgctcaacgccttc
aaagaaatcagcaccatggcagatcgcatcaacctgccaaggaacattatagacagaaca
aacaacttattcaaacaagtgtatgaacagaagagcctgaagggacgagccaacgatgcc
attgcttccgcctgtctttacatcgcctgcaggcaagaaggcgtaccaagaacctttaaa
gagatctgtgccgtctcccggatctccaagaaggagatcggcagatgcttcaagctgatc
ctgaaggcgctggagaccagcgtggacctcatcaccacgggagacttcatgtcccgcttc
tgctcaaacctcggcctgcccaagcaggtgcagatggcggccaccttcatcgccaggaag
gccgtggagctcgacctggtgcctggcaggagccccatctctgtggctgcagcggccatt
tacatggcctcacaggcctctgcagagaagaagacccagaaagaaatcggagacattgcc
ggcgttgcagacgtcacaatcagacagtcgtaccgactcatctacccgcgagctgctgaa
cttttccctccagacttcaagttcgacacacccgttgacaagctgcctcagctgtga
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