Scophthalmus maximus (turbot): 118310432
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Entry
118310432 CDS
T09850
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118310432 (ddx55)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118310432 (ddx55)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Pre-60S particles
Helicases
118310432 (ddx55)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SBF_like
Helicase_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
118310432
NCBI-ProteinID:
XP_035489256
EnsemblRapid:
ENSSMAG00025020114
LinkDB
All DBs
Position
1:18829897..18840548
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AA seq
599 aa
AA seq
DB search
MDNTTDGTWDTLPVRLNDGVLQTLDELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMEQFIQKFPQFTQILLIGG
SNPIEDVEKFKDQGANILIATPGRLEDMFRRKPDGLDLASSVRSLEVLVLDEADRLLDMG
FEASLNSILSLLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAAAAAAAPVQ
KTPSRLSNYYTICRSDEKFNNLVAFLRQHKHEKNLVFFSTCACVEYYGRILEALVKKVAV
CCIHGKMKNKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRC
GRTARIGNQGSALVFLLPMEETYVTFLSINQKCPLQKMPPVKDVVDVLPKVKAMSLADRA
MFDRGMRAFVSCVQAYAKHECSLIFRIKDLDFASLARGFALLRLPKMPELRGRMFPDFTE
TTVDTETIRYKDKNRQKQRQKMLKEKEENPTKRIFVKNKAWSKQNNKKDRKKKRSAKRKH
DEDSDVDDEDMKELLNDSRLLKKLKKGQISEEDFEKQITSKPKSKQKAKGPSHDDSEDV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgacggacgggacgtgggacacgttacctgttcgactgaacgacggagtt
ttacaaacactcgatgagctgaagttcactcacatgacacctgtacagtccgcgtgtatc
ccgctgttcatgagcaacaaggacgtggctgctgaggcggtgactgggagcggaaagaca
cttgctttcgtcatccccatcatagaacttctcctgaagagagaagagaagctgaagaag
atgcaggtcggtgccctggtgatcacgcccacaagagaactggcccttcagatcagtgaa
gtgatggagcagtttattcagaagttcccacagtttacgcagattttactgattggtggc
tctaacccaatagaggacgttgagaagttcaaggatcaaggggcgaacatcttgattgcg
acccccggtcgtctggaggacatgttcaggaggaagccagatggtctggacttggccagc
tcagtccggagtctggaggtgctggttctggatgaggccgacaggctgctggacatgggc
tttgaggccagtctgaacagcatcctcagcctcctgcccaaacagcgccgtacaggcttg
ttttcagccactcagacacaggagctggagaagctggtgagggctggcctcaggaatcct
gtgcgcatcaccgtcaaagagaaaggcgtggctgccgccgccgccgctgcccccgttcag
aagacaccctccaggctctccaactactacaccatctgtagatcagatgagaagttcaac
aacctggtggcgtttctgaggcaacacaagcacgagaagaatctggtcttcttcagcacg
tgtgcgtgtgtggagtactacggccgaattctggaggcgctggtgaagaaggtcgccgtc
tgctgcatccatggcaagatgaaaaacaaacgcaacaagatttttgcagactttcgggcc
ctgaaaagtgggatcttggtgtgtacagacgtcatggccagaggcatcgatatccctgag
gtgaactgggtgctgcagtatgatcctccaagcagtgccagcgcctttgtccatcggtgt
gggcgaacagcacgtatcggaaatcagggcagtgccctcgtctttctgctgccgatggag
gaaacctacgtcaccttcttgtccatcaaccagaaatgtccactccagaagatgccccct
gtaaaggatgttgtggatgtgctgcccaaagtgaaggccatgtccctggcagaccgcgcc
atgttcgatagaggcatgagggccttcgtctcatgcgtccaggcctacgccaaacacgaa
tgtagtctcatctttagaatcaaagatctggactttgcctccttagctcgcggctttgcc
ctccttcgcctgccgaagatgcctgaactgagagggagaatgttccccgatttcaccgaa
acaacagtcgacacagagaccatccgctacaaggacaagaacaggcagaagcagaggcag
aagatgctgaaagagaaagaagagaatcctactaaaaggattttcgtcaagaataaggcc
tggtccaaacagaacaacaagaaggatcgcaagaaaaagaggtcggccaagaggaagcac
gatgaggactctgacgtggacgatgaagacatgaaggagcttttaaatgactctcgcctc
ctcaagaaattgaagaaagggcaaatcagtgaggaggactttgagaaacagataacaagc
aaaccaaagtcaaaacaaaaagcaaagggaccatcacacgacgactcagaggatgtttga
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