Scophthalmus maximus (turbot): 118310433
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Entry
118310433 CDS
T09850
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118310433 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118310433 (arid1ab)
03021 Transcription machinery [BR:
smau03021
]
118310433 (arid1ab)
03036 Chromosome and associated proteins [BR:
smau03036
]
118310433 (arid1ab)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Helix-turn-helix
ARID
118310433 (arid1ab)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118310433 (arid1ab)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118310433 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118310433
NCBI-ProteinID:
XP_047187783
LinkDB
All DBs
Position
5:complement(4235578..4288813)
Genome browser
AA seq
2342 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGSDA
GNAAGGGDSDMKNGNGNLPRVNNNSSNQNDAGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNSYSPFPSRTSYQGQGYG
AMNSPRSNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGSQQPTSTPTLNQLLTSPSS
TRSYPNYPQGDYNNQEGAGKGPGDMGSSQYAGVHPGWQQRAHHPPPMSPGNTGQPASRNQ
PPSPMDQVGKMRGQPYGGPNPYSQQQQGPPTGPGPQQGGSYPGQGYGPPGPQRYPMGMQS
RTPGAMGGMQYGQQMSTYGQQGPGGYGQQSQAYYGQHGPPPHPGQQQAPYPGQPQGTSGP
PYPQQGHPSQPPGQHGQPGAPYQQSQGPHGPPPGQPPYTQPSQSQPGQPPYVPQQQQQQQ
QQQQQQQQQQQQPPPPSQQQQGPGPQSQQGPQGQPGYPQAPGSGQPPPQQTPQQQQGPPQ
QQQPQTGGPPPQAQQPPGHGQQGQPSPYSQTPPLQQQQQQQQQQQQQQAQQQQQQQQAQQ
QQQQQQQQQQQQQQQQQQQSSYQRFPPPPQELSQDSFSSQSSAPPSNQPMASGKSEDGMQ
ARPSSLPVSPSAIFFRQQDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFS
PHTSPHLPGIRGPSPSPVGSPASVTTSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSMN
QSAMGQDRVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHAGMGPYPQNNSMGNYGPQGA
QYGPQGYPRQPGYTGMPNANYPTGPGMGGSMNPIPGQGSGAPYGNMPPGRIGPGQMGTRP
YGPGMAANMAGMPPQVASGMCPPPGMNRKDGGPAMHHGPTNSIHNRPPGYPNMSQGMMGT
GSPYGPGMNSMHGMMNQAGPGPYPMGANMANNTPGMAPSSEFGMDKMNPTQKINNKVEGT
PKPEPKKVKKSSSSTITNEKITRLYELGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRK
PLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKI
ERGEDPPPDFFNTDTKKNQAKVQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPAST
PHTQMPPMPGVRTSVNLQDPFADGGDPAFSRRNAMTPNSQGYQPGMAGPEMMGRMAPYES
NKDPFGGMRKAGEQFMPPGPNSGIGEQYNRAPPGPMGNMQMGQRQQYPYGYDRRQEPGMG
PDGSMGPAAPQPNMMPSGADTGMYSPSRPPPQQRHESYTNQYPGQGAPPGGPYPNQQPGM
YPQQQPNYKRPVDGGYGPPAKRHEGEMYSVPYSGQQQQGPQASGPQGQQDIYNQYNAYPG
GDRRPPGPQGQFPFPFGRERGPSSAGPNSQSPMPPQMMASAMPSGPDGPQGPMWQGRSEM
GYPNYPNRQGPPVPGQGPGYHGMNRSEEMMTPDQRMNHEGQWPGHVNQRPPPFGPGGSGP
PMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHI
GQAPVQQPMIRRDVAFPPGSVEASQPHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAEST
WALDTINILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLI
DPNAAEDTDDEMPMPEGEDMDTDEEDEEDEEAEFSKANPITSSPVQVKQEEESSQIDKSS
DDEEEEKERESSIKKPSTSTSGSSPDPNLHSEKPRQASKFDKLPIKVVRKKNPFLLSHLS
KLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESRMNLLKQRKRSSTATESRKKVRVLEMAS
ENPEKSKSNGEEKPRQQPTQSSDPQRSLAEKTPPLPIGAPVTATIDDVLSARPGSVTEEV
VRGGAEEQKENGKYLFSINPDLQSRRNIKILEDEPHSKDETPLSTLSDWQDSLARRCICI
SNIVRSLSFVPGNDQEMSKHPGLLLLLGRMVLLHHRHPERKQAPVTYEKEEEEDEGVSCE
RDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFP
TLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCR
EMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGAPQF
EPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIG
QS
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgccactctcaacaccagcccgccatccgaactcaaa
aagccggaccgggacccacaggaggagtcggtaccgggcgagaaacagcatgaaaataag
gaaccgggacccgacggcggatcccctggtcagaaggagctgcaggacgggagcgacgct
ggcaatgctgcgggaggaggggattctgacatgaagaacggcaacgggaatctgccccgg
gtaaataataatagcagtaatcagaatgatgcaggcgggcccgaggggaataaccatccc
gggatgggacaccaccacccgggccccttccctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttaccccccgaactcgcacgagcacggctaccccaac
cattacaacagctacagcccgttcccgagcaggacttcttatcagggccaggggtacggg
gccatgaattccccgcgcagcaaccagcctccggcggctggggggcagccaggcaagcag
cagccagcaggaggaaccacagccatggctgcctcctacaacaatcagaggtataacatg
gggagccaacagccgacgtctacgccaactttgaatcagctcctgacatcgcccagctcc
acccggagctacccgaactacccgcagggggactacaacaatcaggaaggggccggcaag
ggaccgggagacatgggcagcagtcagtacgccggggtccatccgggttggcaacaaagg
gcccaccacccgccccccatgagcccgggcaacaccgggcagcctgcgagcagaaaccag
cctccaagcccaatggaccaagtagggaagatgcgcggccagccatacggaggacccaac
ccctactcacagcagcagcaagggcctcccacagggcctgggccccagcagggaggctca
taccctggccagggctatggacctcccggacctcagagatatcccatggggatgcagagc
agaacacctggcgctatgggtggcatgcagtatggacagcagatgtcaacctatgggcag
cagggcccaggaggctacggtcaacagagccaggcctactatggtcagcacggcccccca
cctcaccctggccagcaacaggccccttacccaggccaaccacagggcacctctggacct
ccttacccccagcagggccacccttcacagcctcctgggcaacacgggcagccaggagcc
ccttaccaacaatctcaaggtccccacggccctcctccaggccagcctccctatacgcag
ccctcgcaatctcaaccgggacaacccccttatgttcctcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagccgccgccgccatctcaacagcag
caaggtcctggtccccaaagtcagcagggccctcaggggcagcctggctacccacaagcc
ccaggatcagggcagccgccaccgcagcaaaccccacagcaacagcaagggcctccacaa
caacaacaaccacagacaggaggcccgcctcctcaagcccagcaaccgccaggtcatggc
caacaggggcaaccatcaccttattctcagacaccgccactgcaacagcagcaacaacaa
caacaacaacaacagcagcagcaggcacaacaacaacaacaacagcagcaggcacaacaa
caacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcagcagtcg
tcctatcagaggtttcctcctcctccacaggaactctcccaggattcctttagctcccag
tccagcgctcctccctccaaccagcccatggcttccggcaagagcgaagacggcatgcag
gcccggccgtccagtctgccggtgagcccctccgccatcttcttccgacaacaagacctg
tcgggctccatcgacgacctgcccaccggtacagagggggccctgagcccaggcgtcagc
acttcgggcgtgtccagcagccagggcgagcagagcaaccccgcccagtcgcccttctcc
ccacacacttcgccccacctgccaggcatacgcgggccctcgccgtcgcctgtgggttcg
cccgccagtgtcaccacttcccgcaccggccccctgtcccccgctgctgtgccaggtaat
cagatgcctccgaggcccccaagcgttcagtcggacagcatcatgcactcttccatgaac
cagtcagccatgggccaggacagggtgtacatgcgtaaccctcagatgcctccatacggg
tcccctggacagcctggctccgccttatctccacgccagtcttcaggaggccagatgcat
gctgggatgggaccctacccccagaacaattctatggggaactacgggcctcagggggcc
cagtatggcccacaaggttaccccaggcagcccggctacacagggatgcccaacgctaac
taccccactggtcccggcatgggcggctccatgaaccccatccccggtcagggcagcggg
gctccttatggaaacatgccacccggtaggataggcccgggccagatgggcactcggccc
tacggtcccggcatggccgccaacatggccggcatgccgcctcaggtggcgtccgggatg
tgtccccctccgggcatgaaccggaaggatggcggccccgccatgcatcacggacccacc
aactccatacacaacaggccaccaggttacccaaacatgtcccagggcatgatgggaaca
ggctctccgtacgggcccggcatgaacagcatgcacggaatgatgaaccaggcagggcca
gggccgtacccaatgggagcaaacatggccaacaacacccctggaatggctcccagttca
gagtttggcatggacaaaatgaaccccactcagaagataaacaacaaagtggaagggact
ccaaagcccgagcccaaaaaggtaaaaaagtcaagctcgtccaccatcaccaacgaaaag
attactcgtctgtacgagctcggccccgagccggagaggaagatgtgggtggaccggttc
ctggccttcgccgaggagaaggccatgggcatgaacaacctccccgccgtgggacgcaag
cccctcgacctcttcagactctacgtgtccgtcaaagagatcggcggcctgacccaggtg
aacaagaacaagaagtggcgggagctggccaccaacctgaacgtgggcacgtcgagcagc
gcggccagttcgctcaagaagcagtacatccagtgtctgtacgcctttgagtgcaagatc
gagcgaggcgaggacccgcccccggacttcttcaacacggacaccaaaaagaaccaggcg
aaggtccagcctcccagcccagctggttctggatccctgcagggaccccaaactcctcag
tccaccagtagttcgatggcagagggcggagacctgaagccccccactccagcgtccact
ccacacacacaaatgcctccaatgcctggcgtcaggacaagcgtcaatctgcaggaccct
tttgccgatggtggagacccagcgttttcccgaaggaatgccatgactcccaactctcag
ggctaccagcctgggatggccggcccagagatgatgggtcggatggctccgtacgagtcc
aacaaggaccccttcggtggcatgaggaaagctggagagcagttcatgccaccaggcccc
aacagtgggataggagaacagtacaacagagcccctccaggccccatgggcaacatgcag
atgggccagagacaacagtacccctacggatatgaccgaagacaggaaccaggcatgggc
cctgacgggagcatgggaccagcagctcctcagcccaacatgatgccctcaggcgccgac
acagggatgtactcgcccagccgccctccaccacagcaacggcacgagtcttataccaac
cagtaccctggccaaggagcgccccctggtggcccatacccaaaccaacaaccaggaatg
tatccacagcagcaaccgaactacaagcgtcctgtagatggagggtatggacctcccgcc
aagcgccatgagggagaaatgtacagcgtcccctacagtggtcagcagcagcaggggcca
caggcctcggggccccagggccaacaggacatttataaccagtataacgcgtaccccgga
ggtgaccgcagaccacccggcccacagggccagttccccttcccctttggccgtgagcga
gggccatcgtctgcaggccccaactcgcagtctccgatgcctccccagatgatggcaagc
gccatgccttcaggtcccgatggcccccagggcccgatgtggcagggccgctccgagatg
ggctatccgaactatcccaaccggcaagggcctcccgtaccaggccagggccctggctac
cacggcatgaaccgctccgaggagatgatgacgcctgaccaacgcatgaaccacgagggc
cagtggcccggccacgtcaaccagcggccgccgccgtttggccccggcggttctggacct
cccatgaccagaccgctgccatccacctaccagacctcccagaaccacattcctcaggtg
tccagtccggcacccatgccccgtcccatggagagcaggacgtcacctagcaagtccccc
tacatgcatccgggcattaaggtgcagaaagctggacctccagtacccgcctcccacatt
ggccaggcccccgtgcagcagcccatgatcaggcgagacgtggccttccctccaggctcc
gtcgaggcctcccaacctcacctcaagccccgccggcggctcactatgaaagacataggc
actccagaggcttggagagtgatgatgtcactaaagtcgggcctactcgctgagagcacc
tgggccttggacaccatcaacattctgctgtacgatgacaacagcattaccactttcaac
ttgtgccagctgcctggattcctggagctggtggtcgagtacttcaggcgctgcctcatc
gagatcttcggcatcttgaaggagtacgaggtcggcgacccgggccagcgcaccctcata
gaccccaatgccgcggaggacaccgatgacgaaatgccaatgccagagggcgaggacatg
gacacggacgaagaggacgaggaggacgaggaggcagagttctcgaaggccaatcccatc
acctcctcaccagtccaggtgaaacaggaggaggagagctcccagatagacaagtcttca
gatgacgaggaagaggagaaggaaagggagtcttctatcaagaaacccagtacctctacc
tcagggtcctctccggaccccaacctccactcggagaagcccaggcaggccagcaagttt
gacaaactccccatcaaggtcgtgcggaagaagaatcccttcctgctgagccacttatcc
aagctcgggcagcgacagagctttgacagcggcttgatacactggagcatcggtggggga
gacactaccgaacacatccagacccacttcgagagtcggatgaaccttctcaagcagcgg
aagcgctcgtcaacggcgaccgagagccgcaagaaggtgcgcgtgctggagatggcgtca
gaaaacccagagaaatccaagtccaacggggaggaaaagccccggcagcagccgacccag
tcctctgaccctcagaggtctctagcggagaagacccctccacttcccattggcgcaccg
gtcactgccaccattgatgatgtgctatctgcccgcccggggtcggtcacagaggaggta
gtccgtggcggcgcggaggagcagaaggagaacggcaagtacctgttcagcatcaacccc
gacctccagagccgccgcaacatcaagatcctggaggacgagccgcacagcaaggacgag
accccgctcagcactctgtcggactggcaggactcgctagcgcgacgttgcatctgcatt
tccaacatcgtgcgcagcctctcctttgtcccgggcaatgaccaggagatgtccaaacac
ccaggcctgctgctgctgctgggccgcatggtgctgctccaccacaggcaccccgagcgc
aaacaggcgcccgtcacatacgagaaggaggaggaggaggacgaaggcgtgagctgcgag
agggacgagtggtggtgggactgcctcgaggtgttgagggagaactgtttggtcacgctg
gcaaacatctcaggtcagctggatctctcgatctaccccgagagcatatgtctgccgctg
ctggacggcctgctccactgggccgtctgcccctcggcggaggccctggaccccttcccc
acactggggccccacggctcgctttccccccagagactggttctcgagaccctcagcaag
ctcagcatccaggacaacaacgtcgacctcatcctcgcaacgccgccgttcagccgcctg
gagaagctgtacggctcgctggtgcgcctggtcggcgagcgcaaggtggcggtgtgccgg
gaaatggcggtggtcctgttggccaatctggcccagggcgacagcctggcggcgcgggcc
atcgccgtgcagaaaggcagcgtgggtaacctgctgggcttcctggaggacagcctcgct
gccacgcagtaccagcagagccagagctccttactacaaatgcagggcgcgccgcagttt
gagcccaccagcgtggacatgatgcggcgggcggcccgggccctgcacgccctggccaag
gtggaggagaaccactcggagttcacgttgtacgagtcgcggctactggacatctccgtg
tccccacttatgaactctctggtgtcccaggtgatctgtgacgtactgtttctgatcggc
cagtcatga
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integrated database retrieval system
