Scophthalmus maximus (turbot): 118310480
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Entry
118310480 CDS
T09850
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smau01009
]
118310480 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118310480 (ctdp1)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118310480 (ctdp1)
Protein phosphatases and associated proteins [BR:
smau01009
]
HAD phosphatases
Fcp/Scp phosphatases
118310480 (ctdp1)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118310480 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RTT107_BRCT_5
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
118310480
NCBI-ProteinID:
XP_035489335
LinkDB
All DBs
Position
5:complement(3446808..3506011)
Genome browser
AA seq
1018 aa
AA seq
DB search
MEDPSADSGGDERHSAAEAPAVQVADVRWPSAALPLRLLEWKVKPGTLVNVDSVLALCAP
IPQEQGAEAVRLPEKRVKSDRAGVVKELCCQLGQVIPPGGVIVRIEECSHPIVMKGLCAE
CGQDLTQLQSTNGNQHNPISTATVSMVHSVPELMVSSAQAEQLGREDQQRLHRNKKLVLM
VDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFT
FGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRED
VWKFAPNLITVKKYIYFQGTGDINAPPGSREAQVSRKAGGPSSRPADSTESAGTPGAEEH
NNGLRKRSKDHNVSGKDEPTISLSSQGVPTNEQTHPTGGVEDESVQSQKSVTEAMHGAMH
GAMHGAMHGAGSREAQEADRTNVKEDDSTRTPEAQEGANSAAPSHESNNLDFDLSSDSDN
DSITEKTPSSESDGEGKSCEAKKPGQEGVTPEPGDGDGAKVEDIQGRGDGETSSEVAEPS
GALPPDPELGNGCSDRREPETESQNSEQSGVTMGEELLDQSMEDEEEEEEEVDTDQDDHL
IYLEEVLERIHSEYYARYEAYLGKEAPETPDIRKIVPELKGKTLEGTTLVFSGLYPTNYP
MERTREFYHAKALGASIIKNLILSSQEPSRTTHLIAARAGTEKVRQAQGCKHLHVVNPDW
LWSCLERWERVDEQLYPLKEDYSKMPRSNSPAAFPDNRCSLHKPMFQPAPIHHRPPPPDL
EARTYDPVTGKLIRRGPQVSRPPPYLQASGSLLLSDHREQPCLRGTSKNHQDEAAGSSQD
DGQPGPSRRKRQPSMSETMPLYTLCKEDLDSMGKEVDDILDEESDNESEGRGKEKPGNEE
VEDEEEQRKQQKQEQQQQQQQLQQPGAGQMGTGDGPGAQAQTVDDRLQTPPREASVLGGV
PRGQKRKHEEAKEGKDDEAEDKKFADESSKDSIEEEEGSSSEADEMAAALDAELNDFM
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccttctgcagattccggcggcgacgagagacactcggcggcggaggccccc
gcggtgcaggtggcagacgtccgctggccgagcgcggctctcccgctgcggctgctcgag
tggaaggtcaaacccgggaccctcgtcaacgtggactcggtgctggcgctgtgcgctccc
ataccccaggagcagggcgccgaggctgtcaggctgccagagaagcgggtgaaatcggac
cgcgccggagtggtgaaggagctatgctgtcaactcggacaagtcataccccccgggggc
gtcattgtccgaatagaagaatgcagccacccaatcgtgatgaagggtttatgtgctgaa
tgtggccaggacttgactcagctgcagagcacaaatggcaaccagcacaatcccatctcc
acagcaacggtctccatggtgcacagcgtccccgagctgatggtcagctcagcgcaagca
gagcagctgggcagggaagaccagcagagactccaccggaacaagaagctggtcctgatg
gtggatctggaccagactctgatccacaccaccgaacagcactgccagcgtatgtccaac
aagggcattttccacttccagctcgggcgaggggagccgatgctccacacgcgactacgc
ccacactgcaaggaattcctggagaaaatcgccaaactctatgagttgcacgtcttcacg
ttcgggagccgcctttatgcacacaccattgctggctttctggatcctgaaaagaagctt
ttctcacatcggattctttctcgagatgaatgcatcgatccgttctcaaagacgggaaat
cttaggaacctcttcccttgcggggattcaatggtctgcatcatcgacgaccgagaggac
gtgtggaagtttgcaccaaacctcatcactgtgaagaaatacatctacttccaaggcacc
ggggacatcaacgctccccccgggtcgcgggaagctcaggtgtccaggaaagcaggaggg
ccctccagtcggccagcagacagcacagagtcggcagggacgcctggcgcagaagagcat
aacaatggcctcaggaaaaggtcaaaggaccacaacgtttccggaaaggatgaacccaca
atatctctgtcttctcagggagtgccgacaaatgaacagactcatcccacagggggtgtg
gaggatgaatcagtacaaagtcaaaagtcagtgactgaggcaatgcatggggcaatgcat
ggggcaatgcatggggcaatgcatggggcagggtcgagagaagctcaggaggccgacaga
acaaatgtaaaggaagacgatagcacgaggacaccagaggcacaggagggtgcaaactca
gcagcacccagccatgagtccaacaacttggactttgacctttccagtgacagtgacaat
gactccatcaccgaaaagactccctcatcagagagtgatggtgaaggcaagtcttgcgaa
gcgaagaagcctggtcaggaaggtgttacgccagagcccggtgatggggatggggcaaag
gtagaggacattcaaggtcgaggtgatggagaaaccagttctgaagtagcagaaccatca
ggagctcttccccccgacccagagctgggaaatggctgctcagataggagagagccagaa
acagagtcccagaatagtgaacaatccggggtcaccatgggggaggagctcctggatcag
agtatggaggacgaagaggaggaggaagaggaagtcgatacagaccaagacgatcacctg
atctaccttgaggaggtgcttgagaggattcattctgaatactacgcccgctatgaggcg
tacctggggaaggaggctccagaaacaccagacattcgcaagattgtcccagagctgaaa
ggcaaaacactagagggaacgacgttagtgttcagtggtctgtacccgaccaattaccct
atggagaggacccgagagttctaccatgccaaggcactgggggccagtatcattaagaat
ctaattctcagctcccaagaacccagtcggacgacacatctcatcgcagcaagagctggc
accgagaaggttcgtcaggcacagggctgcaagcacctccacgtggtcaaccccgactgg
ctgtggagctgcctggagcgctgggagcgggtggacgagcagctgtacccactgaaggaa
gactactccaagatgccaaggagcaacagtccagcagctttccccgacaaccggtgctcc
ctgcataagcccatgttccagccggcccccatccaccacagacctccacctccggaccta
gaggcccggacctacgaccccgtcacagggaagctgatccgcaggggccctcaggtgtca
cggccacccccctacctccaggcatcagggtcgttgttgctctctgatcacagggaacag
ccgtgtctcaggggaacttcaaagaatcaccaggatgaggcggcagggtccagccaagac
gatgggcagccggggccgtctcgtaggaaacgacagccgagcatgtcggaaactatgcct
ctatacacactttgcaaggaggatctagatagcatgggcaaagaggtggacgacatctta
gacgaggagagcgacaacgagagtgaggggcgagggaaggagaagcctggtaatgaggag
gtggaggatgaagaggagcagcggaagcagcagaagcaggagcagcagcagcagcagcag
cagctgcagcagccaggagctggacagatgggaacaggagatgggcccggtgctcaggcg
cagaccgtggacgaccggcttcagacgccgcccagggaggccagtgtgctgggtggtgta
ccaaggggccagaaacgtaagcacgaagaagccaaggaggggaaggatgacgaggcggag
gataagaaatttgctgacgagtcgtccaaggactccatcgaggaggaggaaggcagcagc
tcggaggcggacgagatggccgccgcactggatgcagagctcaatgactttatgtga
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