Scophthalmus maximus (turbot): 118310567
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Entry
118310567 CDS
T09850
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04080
Neuroactive ligand-receptor interaction
smau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118310567 (thrb)
04081 Hormone signaling
118310567 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118310567 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118310567 (thrb)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118310567 (thrb)
Nuclear receptors [BR:
smau03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
118310567 (thrb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
118310567
NCBI-ProteinID:
XP_035489494
UniProt:
A0A8D3BED7
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Position
5:complement(5431308..5509653)
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AA seq
415 aa
AA seq
DB search
MSEPAENCSPRWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIVVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTVWDRLEPTQEEWDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKEDKAEDIGQASMANTPEGNKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRDQLKNGGL
GVVSDAIFDLGVSLSAFNLDDSEVALLQAVILLSSDRPGLSSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaattgctccccccgctggaaagatgaggccattcaaaatggt
tacataccgagttacctggacaaggatgagctctgtgtagtgtgcggggacaaagccacg
ggctatcactaccgctgcatcacctgcgaaggttgtaagggtttcttcaggcggacgatc
cagaagaatctcaacccgacctacgcctgcaagtacgaggggaaatgtgtcatcgacaaa
gtgacacgaaaccagtgccaggaatgtcgcttcaagaagtgcattgtggtgggaatggca
accgacttggtgttggacgacagcaagaggctggccaagcggaagctcatcgaggagaac
cgggagcgccgtcggaaggaggagctgcagaagacggtgtgggaccgactggagcccacc
caggaggagtgggacctcatccgcatggtgactgaggcccacatggccacgaacgcccag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagctatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaagataag
gctgaggatattggtcaagcgtccatggcaaatacacctgaaggaaacaaagtggatata
gaagccttcagtcagtttacaaaaataatcacccctgccataacccgagtggtggatttt
gccaaaaaactgcctatgttctgtgagctgccttgtgaagaccagatcattctgttgaaa
ggctgctgcatggagatcatgtcgctgcgagcggctgtccgctacgatccggagagcgag
acgctcacgctgaacggggagatggcggtcacgcgggatcagcttaagaacggaggcctg
ggcgtcgtgtcggacgccatcttcgacctcggcgtgtcgctgtccgccttcaacctggac
gactccgaggtggctctcctacaggccgtcatcctgctgtcgtccgatcggcccggcctg
agcagcgtggagcgaatcgaacgctgccaagaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcgcatttctggcccaagctgctaatgaaggtgacg
gacctgcggatgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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