Scophthalmus maximus (turbot): 118310675
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Entry
118310675 CDS
T09850
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04148
Efferocytosis
smau04218
Cellular senescence
smau04310
Wnt signaling pathway
smau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118310675 (nfatc4)
04020 Calcium signaling pathway
118310675 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118310675 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
118310675 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118310675 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118310675 (nfatc4)
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118310675 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
118310675
NCBI-ProteinID:
XP_035489713
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All DBs
Position
5:24075873..24094738
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AA seq
907 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEEPPPRPSQGPSPVRTAEPESSGAAEDREGALLRLEPAS
GNSSLVTDNHSASSHAVHPICIPSPPPSASQRAGMHSPPPRRAQVREFSGTYESLPARSV
QVSESRVVECPSIQITTISPEDDAAPTISSYWDMGGGGGGWDRERLYLPLLDPFSYRERC
PGSLSPSPASSPSSRGWLSPASSCDSLLVEEDELNEAAINLGLSPSSRPTSPGGKKRRNS
PLASPCTSRRGSYSEELQGYNLEGGDSNPQSQAPPGSCELSIPQKTRKTSLEQLSSREVD
QEQAPGHSSPCPPPESQQTRREPPPLGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLD
WPLPSQFDQYELRIDVQPRPHHRAHYETEGSRGAVKAAPAGHPVVKLCGYTERKPLSLQV
FVGTADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGI
LKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPVAPPGRVLALQAASLPIECSQRS
AQELPVIESVSLTSCCVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNS
NECLLCVRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLPRPSVL
PLDRGTVCSVEGQLRMDGGFHVRADTGADDQGLGFHLPPYPSTYSPPCPMSYHEEYCSKP
DGALEEPGGSRAALSERHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSP
SPSHSSSLSPFPASSPISTSPLPHIATSPYPQYSAYPQEMCPSPPSNPSPYQDMYPAPYS
HYDGWDPQGRVVGMGHGGERDAKIQECPLEFTSSMSMHHITFEEVSEFIGEDIQSYQSAS
QMDNQPN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagctggtgttc
gaggaggagccgccgccgcggccgagccaggggccgtcgccggtgcgcacagccgagccg
gagagctccggtgccgcggaggaccgcgagggcgccctgctgcgcctggagccggccagc
ggcaacagcagcctggtaacagacaaccactcggcttcctctcatgcagttcacccaatc
tgcatccccagcccgcctccctcggccagtcagcgggccgggatgcattccccgcctccg
agaagggcccaggtcagggagttcagcgggacctacgagagcctgccagcgcgctctgtg
caggtttcagagtctcgtgtggtcgagtgtccaagcatccagataaccaccatctccccg
gaagacgacgcagcacccaccatttccagctactgggacatgggtggcggcggcggtggg
tgggaccgagaacgcctctacctccccctgctggaccccttttcctaccgtgaaagatgc
ccgggctccctcagccccagccccgcctccagcccctcctcccgcggctggctcagcccc
gcctccagctgcgactccctgctggtcgaggaggacgagctcaacgaggccgccatcaat
ttggggctctcgccgtcgtcaaggcccacttcccccgggggtaaaaagcgcagaaactcc
cctctggcctccccctgcacctcgcggaggggcagttactcagaggaactgcagggttac
aacctggagggcggagactccaaccctcagtcgcaagctccgcccggcagctgtgagctc
agcatcccgcagaaaaccaggaagacgtcattggagcagctgtcgtccagggaggtggat
caggagcaggctccgggccacagctccccctgcccgccgccagagagccagcagaccagg
agagagccccctccgctgggcatggactacctctctgtgccccctgccctggcctggggc
cggacccgggccagtgcccacagccctctgttcaggtccaacgcgctgccgccactcgac
tggccgctgccgtcccagttcgaccagtacgagctgcgcatcgacgtgcagccgcgccca
caccacagagcccactacgagaccgagggcagcagaggagccgtcaaggctgcgccggcg
ggacatcctgtcgtcaagctgtgtggatacacggagaggaaaccgctctctctgcaggtt
ttcgttggaacagctgacgacagatccatccggccgcatcctttctatcagatacacagg
gtgacggggaagatggtgggcactgccagtcatgagagcgttcaggccgggaccaagctg
ctggacatccccctcaacccagagaacaacatgactgcactcatcgactgcgccgggatc
ctgaagctgaggaactcggacatcgagctgagaaaaggggaaacggacgtcggcaggaag
aacacgcgcgttcgcttggtgtttcgtacccacctccctctggcgccccctgtggcgccg
cctggccgggtcctggctctgcaggctgcctcgctgcccatcgaatgctcccagcgttcg
gcccaggagctgcccgtcatcgagtccgtcagtctcacttcctgctgtgtggagggcgga
gaggaacttctgctgagtggcaccaacttcctgccgatctccagggttcttttcatggag
agggggacagatggtaaattgcagtgggaggaggaggctcatgtcgaccgtgacaacagc
aacgagtgtttgttgtgcgtgagagttcccgcctacagcgacctgtccgtcagtcggccc
gtgtcggtcagcctgtacgtctccaacgggaagaggaagagaagcagcactcactgcttc
aagtatctgcccataatgtttaaagaggaggaccctctgctgccccggccctctgtgctg
ccactggacagggggaccgtgtgttctgtcgagggccagctcaggatggacgggggcttc
cacgtgagggccgacactggggccgatgatcaaggtctgggcttccacttgcccccctac
ccatccacctactctcctccctgccccatgagctaccacgaggagtactgctctaagccc
gatggcgcgctggaggagcccggtggatccagggcggcgctctccgagcgtcaccccagc
ttcgagaacctggagctgggcttcaccgagctccttccccccctgtacccccgcgggcca
cagccgccctccccttctccttccccgtggctggactcaccctacctgtcctcctcaccc
tctccctcccactcctcctctctcagcccgttcccagccagcagtcctatctcaacctcc
cctctgcctcacatcgccacctccccttacccccagtactccgcttatcctcaggagatg
tgtccctcccctccctccaaccccagtccctatcaggacatgtacccggcgccttactcc
cattacgacggctgggatccccagggccgggtggtggggatgggacacggtggagagagg
gatgccaagatccaggagtgccccctggagtttaccagctcaatgtctatgcaccacatt
acctttgaagaagtgtcggagttcatcggcgaggacatccagtcctaccagtcggcctcg
cagatggacaaccagcccaactga
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