Scophthalmus maximus (turbot): 118310716
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Entry
118310716 CDS
T09850
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118310716
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118310716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
118310716
NCBI-ProteinID:
XP_035489811
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All DBs
Position
5:complement(7988566..8005393)
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AA seq
556 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYGSSPSSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTSVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGEATNKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFDCVLIQCSH
RARFHVIRQLCRWDYLPLISQTVSGVYGDVQRVKILYNKKDSALIQLSDGNQAQLAMSHL
NGQKVFGKVMRVTLSKHQTVALPREGLDDQLLTRDFSGSPLHRFKKPGSKNFQNIFPPSA
TLHLSNVRDGMGEEDLRLLFSNSGGTVKAFKFFQDRKMALIQMTSVEEAIQGLMDLHNYD
MGGNHHLKVSFSKSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacggagatgtcgcggttggtgtgaagagaggctcagatgagctcaacatgtatggt
agcagccccagctctatgaccgcgaatggcagtgacagtaagaaacagcgtctggacgaa
tcacctccctccagagttctccacatcaggaaacttcccaatgaagtgtcagagactgaa
gtcattgctttgggtctgccctttggaaaggtcaccaacatactgatgctcaaggggaag
aaccaggcgtttctggagttgggtacagaggaagcagccatcacgatggtgaactactac
acagctgtcacaccacaggtccgaaacacttctgtcttcatccagtattcgaaccacaag
gagctgaaaacagattctgctctcaaccagagggcccaggcagtgctgcaggcggtgtca
gctgttcaggatggaagttctccatcttctgacccaggagttctggaccttgctccacct
cccagccctgtgctgagaattattattgacaacatgttttatcctgtgacactggatgtt
cttcaacagatcttcagtaagtttggcaccgtgatgaagattataaccttcaccaagaac
aaccagtttcaggcccttcttcagttcagtgaccccgtcaatgcacagcaagctaaactg
tctttggatggacagaacatctataattcatgctgtactctgcggatagacttcagtaaa
ttggtcaacctcaatgtcaaatacaacaacgataagagtcgagattacaccagacctgac
cttcctactggagacggagaggcaaccaacaaggatcattctctattgggtaccccatct
ggagctctagcgtcctactccagtggaggaggctactcgtcttcactctccctctcgcag
ggtggaggagccattagtcctctgagtgctgcagccgcggcagcagcagctgcaggtcgc
gttgctctgtctggctccggagtgtcaggagtcctgttggcatccaacctaaatgaagag
atggtcacgcctcaaagtctctttaccctcttcgattgtgtgttaatccagtgcagtcat
agagcacgttttcatgttattcgacaactttgccgctgggattatctgccactcatcagc
caaacagtttcaggagtctatggggatgtccagagggtaaagatcctctacaacaagaag
gacagcgctctgatccagctgtctgatggcaaccaggctcaactggctatgagccacttg
aatggtcaaaaggtgtttggtaaagtgatgagagtgacactgtcaaaacatcaaaccgtg
gctcttcccagagaaggactggatgaccaactactaaccagggatttctctggctctcca
ctccatcgctttaagaagccaggatccaagaacttccagaatatctttcctccctctgct
actcttcatctctccaacgttcgggatggtatgggagaggaagatcttcgtcttttgttc
tctaacagtggaggaactgtcaaggccttcaagttcttccaggatcgtaagatggccttg
atccagatgacttcagtagaggaagccatccaaggactgatggaccttcacaactatgac
atgggagggaatcaccatctaaaagtttccttttcaaagtccaccatctaa
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