Scophthalmus maximus (turbot): 118310812
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Entry
118310812 CDS
T09850
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118310812 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118310812 (vcpip1)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118310812 (vcpip1)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C64
118310812 (vcpip1)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118310812 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
118310812
NCBI-ProteinID:
XP_035490011
UniProt:
A0A8D3D3S8
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All DBs
Position
5:complement(27438220..27444123)
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AA seq
1169 aa
AA seq
DB search
MSLLQSAKKKDKRVLSGTCPDPRCRARLFFPAHGPGSIECTECGQRHEQKNLLTVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDRQTGRAKLLR
DMNQGEMFDCSLLGDRAFLIEPDHVSTMGYGKDRSGSLVYLHDTLEEVKKANGSRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKVLFQDFIDAVEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIVLLDSLSGMRSSGDYSATFLPGLVAEE
QCRGKDGKLNKPICIAWSSSGRNHYIPLVGIKNTVLPKLPARLLPKAWGVPQELIRKYIK
LEADGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHSIHPSLVADVHQYVYRRTGVIGIQP
EEVTEAAKKSVMENRLHRCLICGALSELHVPQDWLVPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPQRDVLVPDYKLSSLNTCNWCHGTSVRHIRGSGLVVYLDGDRTNTRSQGG
KCGCGFKHYWEEKEYDNLPEAFPITLEWGGRVVRETVHWFQYETDTALNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHVQRLTDTTETPQAADTQP
PTKIILTGQKAKTLHKEELTMSRAERSIQQSISEQAFVTQKRRTDKLKQEQRGHGRTSSP
GGSPETSSSSAPATPTKSSSPSLSNNEKKIRVTTSDGRQAMLTLPAHTTFSELRGSIAKQ
FGVPPAQQCIRYGFPPKELVPPKGGEEKEPVALQHGDRVTVEILRGPEDKSPSASIPRAS
SSHSVKSEDTATSGRMSTGELQDSIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVF
YNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDTAGHFPVGPDVEELVKEALV
QLRSESATRGSREGSPSHGVLRLGSGGVVRKKEQLQSVTAFQGKGHSLGSAGDSSPPEHR
PITRQHSSGVDLSASVSRDPPDLSDIPEDATRELVRMAPGFVTTKDSRGLDPSLMEQQRR
KLQEMVSSIQASMERHLREQNATGDGASHERTGGTNRGSGQPASTAGQAPPVAAGASSAG
QADGKAEDPDEMESQDAGQSSTSEPMDHS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgcagagcgcgaagaagaaagacaagcgcgtcctgtccgggacctgcccc
gacccccggtgccgggcgcggctgttcttccccgcgcacggccccggcagcatcgagtgc
accgagtgcggacagaggcacgagcagaagaacctgctgaccgtggaagaggtgacggac
ccggatgtggtgctgcacaacctgctgcggaacgccctgctcggcgtcaccggggccccg
aagaagggcaccgagctggtgaaggtgatggggctctccaactaccactgcaagctgctg
tccccggtgctcaccaggtacggcatggaccgacagacgggccgggccaagctgctgagg
gacatgaaccagggcgagatgttcgactgctcgctcctgggggaccgggctttcctgatc
gagccggaccacgtgtccaccatgggctacggcaaggaccggtcgggcagcctggtctac
ctccacgacacgctggaggaggtgaagaaagccaacggcagcagagagtgtctcatcccg
gtccacgtggacggagacggacactgcctggtccacgccgtgtcccgagcgctggtgggc
agagaactgttctggcacgcgctgagggagaacctcaaacagaacttcaagcagaacctg
gaccgctacaaagtcctgtttcaggacttcattgatgctgtggagtgggaggacatcatc
aacgagtgcgaccccctgttcatcccgcctgaaggtgtgccgctcggcctacgcaacatc
cacatattcgggttagccaacgtgctccaccggcccatagtgctgctggactcgctgagc
ggcatgaggagttctggggattactcggccaccttcctgccgggcctggtggcagaggag
cagtgccgtgggaaagacgggaagctcaacaagcccatctgcatcgcctggagcagctcc
ggcaggaaccactacatccctctggtgggaatcaagaacacagtgctgcccaagctgccg
gcccgtctgctgccgaaggcctggggcgtccctcaggagctcatcaggaagtacatcaag
ctggaagcggacgggagctgtgtgatcggcggcgaccgcagcttgcaggataaatatctg
atgaggctggtcaacgccatggaggaggtgttcatggagaagcacagcatccacccgtcg
ctggtggctgacgtgcaccagtacgtctacagacggaccggcgtgatcggcatccagccc
gaggaggtgaccgaggcggctaagaagtccgtgatggagaaccggctgcaccgttgcctg
atctgtggcgccctctctgagctccacgtcccacaggactggttggttcctggtgggaaa
ctctacaacttggccaaatccacacatggtcagctgcggccggacaagaactacagcttc
cccctcaataacgtggtctgctcttatgacccgcagagagacgtcctcgtcccagattac
aaactgagctccctcaacacctgcaactggtgtcacggcacgtcagtgcgccacatccgc
ggcagtgggttggtggtttacctggacggggaccgaaccaacacccgctcccaggggggg
aaatgtggatgtggcttcaaacattactgggaggaaaaggagtatgacaacctccccgag
gcgttccccatcacgctggagtggggcggccgggtggtgcgagagactgtgcactggttc
cagtatgagaccgacacagcgttgaacagcaatgtgtatgacgtggctatgaaactggtc
accaagcacttcccgggcgagtttggcagcgagctcctggtgcagaaggtggtaaacacc
atcctgcatcacaccgccaagaagaacccggacgagtataacccggtgtctatcgatggg
gctcatgtccagcgactgacggacactacagagaccccgcaggctgcggacactcagccg
ccgacgaagattatcctgactggtcagaaagcgaagacgctccacaaagaggagctgacg
atgagccgagcagagcgcagcatccagcagagcatcagcgagcaggccttcgtcacgcag
aagcgacggactgacaaactgaagcaggagcagagaggccacggccggacgtcttccccc
ggcgggtctccagaaacctcctcctcttcagctccggccacgcccacaaaatcctcatcc
ccctccttgtccaataatgagaagaagatccgcgttaccaccagcgatggccgacaggcc
atgctgaccctgccggcccacaccaccttctcagagctgcgggggagcatcgccaaacag
tttggcgtgccgccggcgcagcagtgcatccgctacggcttcccgcccaaggagctggtc
cccccgaagggcggcgaggagaaggagcccgtggcgctgcagcacggcgaccgggtgacg
gtggagatactgaggggccccgaggacaagagcccctccgcctccatcccacgggcctcc
agttcgcactcggtgaagagcgaggacacggcgacgtccggcaggatgagcaccggggag
ctgcaggacagcatcgaccttgagatgtcctccctctgtctcctagcgaccttgatgggt
gaggatgtttggtcatacgctaagaagctgccgcacttattccagcagggcggcgtcttc
tacaatatcgtcaagaaagacatgggcctgatggacgggaaacactgcacgctgcctcac
ctgacggggaaaacgtttgtttacaacgcagcagaggagcgtctggagctctgtgtggac
accgccggccacttccccgtcggccctgacgtggaggagctggtgaaggaggcgctggtg
cagctgcgctcggagtccgccactaggggcagcagagaggggagtccgtcgcacggcgtg
ctgcgcctcggcagcggaggcgtcgtccgtaagaaggagcagctgcagagcgtcacagcc
ttccagggtaaaggtcactctctgggcagtgccggtgactcctcccctccagaacaccgg
cctatcacacgccagcacagcagcggcgtggacctgagcgccagcgtgtccagggaccca
ccggacctgtcggacatcccagaggacgccaccagggaactggtccgcatggcgccgggc
ttcgtcaccacgaaggacagtcgaggtctggaccccagcctgatggagcagcagcggagg
aagctgcaggagatggtctcctctatccaggcctccatggagcgccacttgagagagcag
aacgccacaggggacggggcgagccacgagcggacaggcgggactaaccggggctcgggc
caaccggcatccacagccggtcaagctcctccagttgcagcgggtgcctcatcggcaggc
caagccgatgggaaggcagaggatccggacgagatggagagccaggacgctggacagagc
agcacctctgaacccatggatcactcctga
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integrated database retrieval system
