Scophthalmus maximus (turbot): 118310985
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Entry
118310985 CDS
T09850
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118310985 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118310985 (copb2)
Membrane trafficking [BR:
smau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
118310985 (copb2)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118310985 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_Vps41
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
118310985
NCBI-ProteinID:
XP_035490330
LinkDB
All DBs
Position
5:14302078..14308912
Genome browser
AA seq
947 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAESKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESTSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVAASHENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIANQL
AVEAESEQKWKQLAELAISKCDFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEYYLRETCLGNSRPATDYPLITPNEDRNILEEA
QGYEPIGTFIPRKTHAPEEEEEEEEEEEEEEECSLAGAPVAAAPAGPVTPLQPEPSAPTP
VDDKEEEIPEFSHKDKTLDELEVDLDNMDLDDIDTTDVNLDDDFSDD
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcggaggctgaccgccaggtcggaccgagtgaagagt
gtggaccttcacccgactgagccatggatgctggccagtctgtacaacggcagcgtctgt
gtgtggaaccacgaaacacagactctcgtcaagacttttgaggtgtgtgacctccctgtc
agagcttctaagtttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactacaacaccctggagcgggtccatatgtttgaggcccactccgac
tacatccgttgcatcgctgtccatccgacccagccctacatcctcaccagcagtgatgac
atgttgatcaagctatgggactgggagaagaagtggtcatgcagtcaggtgtttgagggt
cacactcactacgtcatgcagattgtcattaaccccaaggataataatcagtttgccagt
gcctccctggacaggacaattaaggtttggcagcttggctcttcatctcccaatttcact
ttggaaggccacgagaaaggagtcaattgtattgactattacagtggaggagacaagccc
tacctcatctcaggggctgatgaccgccaagtcaagatctgggactatcagaacaagacc
tgtgttcagactctggagggccacgcccagaacgtctcctgtgtcagcttccacccagag
ctgcccatcatcatcactggatcagaggatggtaccgtgcgcatttggcattcaagcact
taccgcctggagagtacgctgaactacggcatggagagagtgtggtgtgtgtgtggcctc
aggggctcaaacaatgtggcactgggctacgatgaaggcagcatcattatcaaggtgggc
cgtgaagagccagccatgtctatggacactaatggcaaaatcatctgggccaaacacagt
gaaatacaacaagcaaacctgaaggccatgggtgatgccgaaagcaaggacggagagagg
ctgccactggccgtcaaagacatgggcagctgtgagatttaccctcaaaccatccagcat
aaccctaacggaaggtttgttgtggtgtgcggagatggagagtatatcatttacaccgcc
atggctttgagaaacaagagctttggttccgctcaggagtttgtctgggcccacgactcc
tctgaatatgccatcagagaaagcaccagtgtcgtcaaaatcttcaaaaacttcaaagaa
aagaaatcctttaaaccagattttggagctgaagggatctatggaggcttcctgctcggg
gtgaggtcagtgaatggcctcgcattttatgactgggagaacacagaactggtccgccgc
attgagatacagcccaaacatatcttctggtcagactctggtgagctggtttgtattgct
acagaggagtccttcttcatcctgcgttacatggcagaaaaagtagctgcctcccatgag
aacaatgaaggagtgacagaggatggtattgaagacgcctttgaggtccagggagagatc
caggagattgtgaagacgggactttgggtaggggactgcttcatctacaccagctctgtg
aatagactcaactactatgttggaggagagatcgtcacaattgctcatctggacagaacc
atgtacttactgggttatatacccaaagatgaccgtctgtaccttggagacaaggagctc
aacattgtcagttactctctactcgtctccgtcctggagtaccagactgctgtaatgagg
agggattttgggatggctgacaaggtgttacccacaattcctaaagagcagcggaccaga
gtggcccatttcctggagaaacaggggttcaagcagcaggcactggctgtgtccacagac
ccagagcacaggtttgagctggccttgcagctaggagagttaaagatcgccaatcagctg
gctgtggaagcagagtcggagcagaaatggaaacagctagcagagctggctatcagcaag
tgcgatttcagcctggcccaggagtgcctgcaccacgcccaggattacggaggcctgctc
ctcctcgccacagcctctggtaacgccactatggtgggcaagctggctgagggggccgag
agggacgggaagaacaatgtggccttcatgacctacttcctgcaggggaaacttgatcag
tgtttggagcttctgatcaggacaaaccgactccctgaggctgccttcctggctcgcacc
tacctgcctagccaggtgtcccgcgtggtcaaattgtggagggagaacctggctaaggtc
aaccagaaggcggctgaatccctagcagaccctacagagtacgagaatctgttccccgga
ttgaaagaagcctttgctgccgagtattatctgagagagacctgcttgggcaactccagg
cctgctacagattatcctcttatcactcccaatgaagacaggaatattcttgaggaggct
caaggatatgaacccataggaaccttcattcctcgaaagacacatgctcctgaggaggag
gaagaggaagaagaagaagaagaagaggaggaggagtgttcattggcaggagctcctgtt
gctgcagcaccagcaggacctgtgacacctttacaacctgaaccttctgctcctacacca
gtggacgataaggaggaggaaatccctgaattttcacacaaagataaaactctggatgag
ctggaagtggacctggataacatggatctggatgacatcgacaccacagatgttaacctt
gatgatgacttctcagatgattga
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integrated database retrieval system
