Scophthalmus maximus (turbot): 118311044
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Entry
118311044 CDS
T09850
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau00514
Other types of O-glycan biosynthesis
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118311044 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118311044 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118311044 (colgalt2a)
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118311044 (colgalt2a)
Glycosyltransferases [BR:
smau01003
]
O-Glycan biosynthesis
O-linked Gal type
118311044 (colgalt2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
118311044
NCBI-ProteinID:
XP_035490426
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Position
5:complement(12995185..12999999)
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AA seq
575 aa
AA seq
DB search
MPPPDLVGLRLFIVILAGRLFLLSASTETLLKPTVLITILARNTQHSLPYFLGCIDRLDY
PKDRIAIWASSDHSVDNSTAMLEEWLRGVQQQYHSVEWRPMEQPSSYADEQGLKHWPDSR
FIHVMKLKQAALRAARRLWTDYILFVDSDNLLTNRHVLSDMMAENRTIVAPMLESRSLYS
NFWCGMTPQGFYRRTPEYIPICQWKRRGCFAVPMVHSTYLLDLRRRASRALSFHPPHPEY
PYHLDDIMTFAFSAKQAGVQMYVCNRDRHGYLPVPLEQDQTLEEEQESFAHTLTEALIDY
TMEPSQYVHTAPKDPGKMGFDEIFLINLKRRSDRRERMLSSLAVLGINASLTEAVDGKAL
NSSQLQAMGIDMLPGYKDPYSDRVLTRGEIGCFLSHHNIWKQVVQQKLRQVLVLEDDVRF
EPRFCSRLQAIMESVMRVGLDWELIYVGRKRLQVKEPENWVKGVRNLVHPGYSYWTLGYV
LSLQGAKRLLRAKPLHKMLPVDEFLPIMFNKHPKDDYMQYFGHRELRAFSVEPLLLFPTH
FTGEPGYFSDTETSTIWDDEAVETDWDRDAGQTPA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctgatttagtgggactccgattattcattgtgattctggctggaagactc
tttctcctgtccgccagcacagaaaccctcctgaaacccacagtgctgatcaccatcctt
gcacgcaacacacagcacagcctcccttacttcttgggatgcattgacagactggattat
ccaaaggaccgaattgccatctgggcgtcctctgaccacagtgtggacaacagcacagcc
atgcttgaggagtggctcagaggagtccagcagcagtaccactctgtggagtggagacca
atggagcaaccaagctcttatgcagacgagcaaggtctaaagcactggcccgactctcgg
ttcatccatgtgatgaagttaaagcaggcggcactcagagctgccagacgactgtggact
gactacatattgtttgtggacagtgacaacttgctgacaaaccgccatgtgctctctgac
atgatggcggagaaccggacgattgttgcacccatgttggaatcaagaagtctttattcc
aacttctggtgtggaatgactccgcagggcttctacagacgaaccccagaatatattccc
atttgtcagtggaagcggcgcggctgctttgccgtccccatggtgcactccacctacctg
ctggacctgaggcgcagagccagccgagcattatccttccatcctcctcacccggagtac
ccttaccacctggacgacatcatgacctttgctttctctgcaaagcaagcaggagtccag
atgtacgtgtgcaaccgggaccgtcatggatatttaccggtgcctctcgagcaagaccag
actctggaggaggagcaagagagttttgcccacacgctgacagaggcactgattgactac
accatggagccttcacagtatgtgcacactgcaccaaaagacccaggaaagatgggattt
gatgagatctttctgatcaacctgaagcgccgctcagaccggcgggagaggatgttgagt
tctctggccgtccttggtatcaatgcctccttgacagaggccgtggacggcaaagcactg
aactcctctcagctgcaggccatgggcatcgacatgctgcctgggtacaaagacccgtat
tcagaccgcgtgctgacaagaggagagatcggctgcttcctcagccaccacaacatctgg
aagcaggtggtgcagcagaaactgcggcaggtgcttgtgctggaggatgacgtgagattt
gagcccagattttgcagcaggctgcaagccatcatggagagcgtgatgagggtgggactc
gactgggaattgatttatgtgggtcgtaagcgactgcaagtgaaggagccagagaactgg
gtgaagggagtccgtaaccttgtgcacccaggatactcctactggaccctgggttatgtc
ctgtccctgcagggggccaaaaggctcctgcgggcaaaacctctccacaaaatgctgcct
gttgatgagtttttaccgatcatgttcaacaagcaccccaaagacgactacatgcagtat
ttcgggcacagggagctgagagcgttttcggtggagcctctgttgctcttccccacacat
ttcaccggagagcccggctacttcagcgacacagagacgtccaccatctgggacgacgag
gcagtggagacggactgggacagggacgcgggccaaacaccggcctga
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