KEGG   Scophthalmus maximus (turbot): 118311089
Entry
118311089         CDS       T09850                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118311089 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118311089 (exosc4)
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118311089 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     118311089 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 118311089
NCBI-ProteinID: XP_035490536
UniProt: A0A8D3BE00
LinkDB
Position
5:complement(18843829..18845745)
AA seq 245 aa
MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEIRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRQHLQEVS
SLTGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggtctggagctgctgtcggaccagggataccgtctggatggacgcaaagccgcc
gagctgcgcaaagtccaggcccgcatgggagtgttcgcgcaggcggacggttctgcgtac
ctcgagcagggcaacacgaaggcgctggccgtggtgtacggtccacacgaaataagaggt
tcgcgcagtcgtgctcttcacgatcgggctgttatcaactgtcagtacagcatggccacg
ttcagcacagcggagaggaagaggagaccccacggggaccgcaagtccaccgagatgagc
ctccacctcaagcagacgttcgaagccgccgtgatgacccagctctacccgcggtctcag
atagacatctacgtaaagatcctgcagtcagatggagggaactacagcgtgtgtgtgaat
gccgccactctggcggtgattgacgccggcatccccatgcgggactacgtgtgcgcgtgc
accgtgggatttgtggacgagacacccctcgccgacctttgctacgcagaggaaagtgga
ggggtgagctctttggccctggcgctgcttccccgaggtggacagatcgctctgctgcag
atggacgccaggctacatcaggatcacctggaggcactgatcgaagcggccatgacagca
tgtaaaggtgtgagcaaggtgctggatgaggtggtgcgacagcatctccaagaagtgtcg
agtcttactggagagtga

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