Scophthalmus maximus (turbot): 118311188
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Entry
118311188 CDS
T09850
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118311188 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118311188 (chd8)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118311188 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
118311188
NCBI-ProteinID:
XP_035490693
UniProt:
A0A8D3AT19
LinkDB
All DBs
Position
5:10804889..10825600
Genome browser
AA seq
2556 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDESFSQGSTDPVEEALKLALGQVDPPSEPEPTPELMVNA
GLGDPVAAPAIPDPAPVQVHTQPLVPVATAQTVSIATAPTVAPGPAPAGAVPQIQAQTTM
SIVSSTSVASSSTVLLSSPLTVSSAPATSTAATPQYTQITHQFTPQQLAAITQQAGGKIV
ILKGPQGQAQVLQTVSGATGQTTGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKV
GAGVQRLLQSPNGPAKQLFLTSMPQQVQQTQGQTVQVQMAQGQTQVQLQPQGQIQGQVQL
QPAMQTQGGEAKRITLVLQQPSQAGSVGQQQITQVQTTQGGQQQPTRLVLGQLPGGKLVL
QGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGAGTTGGPQVLQIS
QGQGGQRVAVPLKMLLQPQTSSASSGGGTVSVVKVINTSTAGPSTTTTTTPSQAIRISKA
PGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPASQTSPEVGGTV
TVVSASKKKSSGGGSKKKSSVAGGATPKNAGGADKKGKVKTPGGTAGVAGSIVIAGTGNK
SKSKTKTNTITLVGAKKRKRNGSSDHSDGELSPASPTALDDDMIMKRRSNRVVKRKKYTE
DLDIKITDDEDEQEDVDVTTTAAAVASISGGTAAQLKQELELDGDGLASMQFFVENPSEE
DAAIVDKVLSMRLTKKEVSVGQYTNVEEFFVKYKNYSYLHCEWASLEQLEKDKRIHQKIK
RFKTKYAQMRHIFQEEEEPFNPDYMEADRILDVSHSVDKDNGEPVIYYLVKWSSLPYEDA
TWELKEDVDEGKVEEFIKIMDRQPRLKKTARPQASSWKKLEETREYKNGNILREYQLEGV
NWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVFNAGLQGPFLVIAPLSTITNWEREFC
TWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFDALITTFEMVLSDCPELRE
ISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQF
PSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKK
YYRAILERNFSFLSLGATSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIIAELREVYDP
MAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYER
IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQ
AQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKEGNNNGQIQ
QFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKAS
FVASENRNDIALDDPEFWEKWAKKADIDMDTINRKNTLVIDTPRVRKQTRQYSTLRGEGG
DLSDMDSDDEYPPANSRQSRTSRRSERHTGGGYGRTDCFRVEKHLLVYGWGRWRDILSHA
RCKRRLSDRDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPTTLLNHSGLSI
PVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDESYRKHLKHQCNKVLLRVRMLYYL
KQEVIGEHADSVLKGAYIRNVDIWMPEMEQQEVPAGWWDAEADRSLLAGVFKHGYEMYTT
MRADPCLCFLERAGRPDDKAIDAEQHTGDPEMGDEAEYDKYSEDPEFKPASRHKDLFDEP
DSMNVDDEISVEDKAAPVVTESFSSQSSNWPSSSSLTARMRRLITAFQRSYRQEQLKIEA
EAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKLKKELGLPEDAE
LDFDWTRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPGRGEDPSQLSQTVAPITEE
RASRTLYRISLLRRLRERVLPNPSLEEHLSLAPTSSELPTWWNIPDHDRQLMLGASLHGV
SRTELSIFPDPQFTFTQAREEFIQNQQAPPPPPPPQALPIMPLIQPKTEEDLSGVKEEGA
DEGARLLGAEIGVVLQSKPLSHHDGKAHGQDWSFKRSRARGDRTGGGRKGEGGSDSDSDS
DSGSSSSGRSGSSDDSGESEEEGERAGKVCDVDEENSSLSMTQSQDGVPPPDPLRVDWPK
DRVLINRLDNLCSLVVTGQWPSGRRYMPEAQLNPTSELAGEEMSYTRVVRKPSSMPGAPG
AEGEDGEFTVKLLKEEGLKLTFSKQALMPNGSGGESSSRKRRKDQELSDPDGLLDPLERT
PRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRADKAVTGSEKVKLINMRTGKKVG
AAFCPMLQDLREYLEENPDSAVAPEWSETVRNSGFLPETFFHRLLTEHSEIPKKSRRRHH
HHHHHHHHHHTPEPAPEDPSLDGVEEETLVSDGAYMMDEEDLETSHHFLTSPDFDVKMVG
GDSISQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgaggacactcccctgtttaacctggatgccctg
ccggacgaatccttctctcagggctccacagaccctgtggaggaggccctcaagctggcg
ttgggccaggtggacccaccgtcggagccggagcccactcctgagctcatggtcaacgca
ggcctcggtgatcctgtagcagcccccgccatcccagaccctgcccctgttcaagtccac
acacagccgttggtgcccgtggcaactgctcagactgtttccatagctacagctcccact
gtggcccccggtcctgccccggctggtgccgtacctcagattcaagcccagaccaccatg
tccattgttagcagcaccagcgtggcgtccagtagcactgtcctgctgagctcacctctg
actgtttccagcgccccagctaccagcactgccgcaacaccgcagtatacacagattact
caccagttcactccccagcagttggctgccatcacacagcaggccggtggtaaaatagtt
atcctcaaagggccacagggtcaagcccaagtgctgcagactgtatcaggagccacaggc
cagaccactggaaaggttatccgtgttttgtctggcacgcctctcaaacctggcatgtca
atactgcagggggggacggtcttgaatcaggcaagcccaggacaagctcaagtcaaggtg
ggtgcaggggtgcagaggttgctgcagtctcccaacgggccagcgaaacaactgtttctc
acgtccatgccccagcaggtacagcagacgcaaggccagacggttcaggtgcagatggct
caaggccagacacaagtccaacttcagccccaaggccagattcagggccaggtgcagctc
cagccagcaatgcaaactcaaggtggtgaagcgaagcggatcaccttggttctccagcag
ccctctcaggccggatctgtgggtcagcagcagatcacacaggttcaaaccacccaaggg
ggccaacagcaaccaactagactagtgttgggtcagctccccgggggcaaactggtgctc
cagggaagccagctcgctgccctgacccaggctcgagctgcaggtcaggctggggggcag
cccaaagtcctcacaattcagctgcaggtacagcagcagcccaaccaacaaggtggagtt
aagtaccagctggtgtcaggagcaggaactactggtggcccacaggtgttgcagatctcg
cagggccaaggaggacaaagagttgcagtgccgctcaaaatgcttctgcagccacagaca
agctcagcatcctcgggtggcggcacagtctccgtggtgaaggtcatcaacacatctact
gcaggcccctccactaccacgaccaccactccgtcccaggccatccgcatttccaaggcc
cccggtgaacctgcctctgtccgacgagtagaaatcctgtgtaagcaagagaaagcgaac
cgcattgtggccgaagctatagcccgggccaaagcacgcggtgagaagaacctgcccaga
gtcctgaaccaggatgagcttccagccagtcagacctctcctgaggtggggggcaccgtg
actgtcgtgtctgcctccaaaaaaaagagcagtggaggagggagcaagaagaaaagttct
gtcgctggaggagcaacgcccaagaatgcaggtggagccgacaaaaagggcaaagtgaag
acgccagggggaacagctggagtggccggaagcatagtgatcgctggaaccgggaacaag
agcaaaagcaagaccaagacaaacactatcactctagtgggagcaaagaaaagaaagagg
aatggttcctcagaccattcggatggggagttgagtcctgcctcgcctactgcactggat
gatgacatgattatgaagaggcgctccaatcgcgtggtgaagaggaaaaagtacacagaa
gacctggacataaagataaccgatgacgaggacgagcaggaagatgtggacgttaccaca
acagcggcagccgtggcctccatcagtggcgggaccgcagcacagctcaaacaggaactg
gagctggacggtgatggactggccagcatgcaattctttgtggaaaacccaagtgaggaa
gatgctgcaattgtagacaaagttctgtccatgagattaactaaaaaagaggtgtctgta
ggccagtacaccaatgttgaggaattctttgtgaaatacaagaactattcttacttacac
tgcgagtgggccagtttggagcagctggagaaggacaagaggatccatcagaagatcaag
aggttcaagaccaaatacgcacaaatgaggcatatcttccaggaggaggaggaacctttt
aacccggactatatggaggcagacaggatcctggacgtgtcccatagtgtggacaaagac
aacggcgagcctgtcatctactacttggtgaagtggtcctcgctgccttatgaagacgcc
acttgggagttgaaggaggacgtggatgagggcaaggttgaagagttcatcaaaatcatg
gaccgccaacctcgcctgaagaaaacagcacggcctcaagccagttcatggaagaagctg
gaggagaccagagagtacaagaacggcaacatactaagagagtaccaactggaaggagtc
aactggctgctcttcaactggtacaacaggcagaactgtatcctggcagacgagatgggc
ttggggaagaccatccagtctatcgcacttctgtcagaggtgtttaatgccggactccaa
ggccccttcctcgtcatcgctccactctccaccatcaccaactgggagagggagttctgc
acgtggactgacatgaacgccatcgtctaccacggcagcctggccagccggcagatgatc
cagcagtatgagatgtactgcaaggatgacaaggatcatttgatcccaggtgcatacaag
tttgatgccctcatcacaacctttgagatggtgttgtccgactgccccgagctgagggag
atctcctggcgctgtgtcatcatcgacgaggctcatcgcctcaagaatcgcaactgcaag
ctgttggacagcttgaagatgctggatctggaacacaaagtgttgttgaccggcactcct
ctccagaacactgtggaagagctcttcagtctgctgcatttcctggagcctgctcagttc
ccatcggagactgaattcctcagagactttggagacctcaaaacagaggaacaggttcaa
aagctgcaagccatcttgaaacccatgatgttaaggaggctcaaggaggatgttgagaag
aacttggcgcccaaacaggaaactatcatcgaggtcgagttgactgacatccagaagaaa
tactaccgagccatcctggaacggaacttcagtttcctcagtttaggggcaaccagtaac
agcaacgtcccgaacctgctcaacactatgatggagctgcgcaagtgctgcaaccacccc
tacctcatcaatggcgcagaggagaagatcatagcagagttgcgggaagtttatgacccc
atggctcccgactttcatttgcaggccctgattcgatcggccggcaagttggtgctactg
gacaagctgctgcctcgcctcaaggccggaggccacaaagtgctcatcttctcccagatg
gtgcgctgcttagacatcctggaggactacctcatcaacaagagatacctctatgagcga
attgatggcagagtgcgtgggaacctacgtcaggctgccatcgatcgcttcagcaagcct
gactcagaccgcttcgtctttctgctgtgtacccgtgccggcggcctgggtatcaacctc
actgctgctgacacctgtgttatattcgactctgactggaaccctcaaaatgacctgcag
gcccaagcaaggtgtcatcgaattggtcagtccaaggcggttaaggtttaccgtctgata
accaggaactcctatgagagggagatgttggataaagcaagtctgaagcttgggctggac
cgcgctgtcctgcagagcatgagtggcaacaaagaaggcaacaacaatggacaaatccag
cagttctctaagaaggagatagaagacctcctgaggaaaggagcgtacgccgctatcatg
gacgagaatgacgagggcagtcgcttttgtgaggaggacatcgaccagatccttcagcga
agagccaccaccatcaccatcgagagcgagggcaagggctccaccttctccaaggccagc
tttgtggcctcggagaaccgcaacgacatcgccctcgatgaccctgaattctgggagaag
tgggccaagaaagccgacatagacatggataccatcaacaggaagaacacccttgtgatc
gacactcccagagtacgcaagcagacccgtcagtattccactttacgaggcgagggtgga
gacctgtccgatatggacagtgacgatgagtatcctcctgccaattccagacagtctcgt
acctcccggcgctccgagcgccacactggaggtggatacggccgcacagattgcttccgg
gtggagaaacacctgctcgtctatggttggggtcgctggagggacatcctgtctcatgct
aggtgcaagcgccgtttgagcgaccgcgatgtcgagacgatctgccgcgtcatcctggtc
ttctgtctgctccactaccgcggagatgagaacatcaagagtttcatctgggagctcatc
acgccgccggagaacggacgtgaacccacaacgctgctcaaccactctggcctgtctatc
cctgtcccgagaggcaggaagggtaagagggtaaaggctcagagcacatttgatgttcag
aaagtggagtggatccgcaagtacaaccctgacaccctgctgctggatgaaagctaccgc
aaacacctcaagcaccaatgcaacaaggtgttgctgagggtgcgtatgctctactacctg
aaacaggaagtgattggtgaacatgctgactcggtcctgaaaggggcttacatcaggaat
gttgatatttggatgcccgagatggagcagcaggaggtcccggcaggatggtgggacgcc
gaggcagaccgctcactgcttgccggcgtattcaaacatggttatgaaatgtacaccaca
atgcgtgccgatccctgcctctgtttcctggagagagccggtcggcctgatgacaaggcc
atcgacgccgagcagcacactggtgaccctgagatgggcgacgaagctgagtatgataaa
tactcggaggacccggagttcaagcctgcatcgaggcacaaagatcttttcgacgagcct
gactctatgaacgtagacgacgagatttctgttgaagataaggcggcaccggtggtcaca
gaaagcttctcgagccagagtagcaactggccctcgagctcgtcgctgacggcgcggatg
cggcgcctcatcacggctttccaacgcagctacagacaggagcagttgaagatcgaagcc
gaggcaaagggcgaccgccggcgcaggcggtgcgaacaggccagcaagttgaaagagatt
gcgcgacaggagcgccagcagaggtggacacgcagggaggagtgtgacttctaccgcgtg
gtttcgacgtttggtgtggaaaagctgaaaaaggagctgggtcttcccgaggacgcggaa
cttgattttgactggacacgtttccgtacctttgctcgtctggataagaaaactgacgag
agcctcagtcgttatttccgctcttttgtcgccatgtgccggagggtttgccacctccgc
ccaggccggggtgaagatccatcgcagctttcccaaaccgtggcccccatcacagaggag
cgcgcgtcccgtaccctttaccgaatcagcctcctgcgtcgcctccgcgagcgagtcctg
cccaacccctcgctggaagagcatctgtctctggccccgaccagctctgagctgcccacc
tggtggaacattccagaccacgaccgtcagctgatgctgggtgcttctctacacggcgtc
agtcgcaccgagctctccatcttccctgacccgcagttcactttcactcaggcaagggaa
gagttcatccagaaccagcaggccccaccgcctccgcctccgcctcaagcgctacccatc
atgcccctcatccagcccaagactgaggaggacctgtctggggtgaaagaggagggagcg
gacgagggcgcccggctgctcggggctgaaatcggtgttgtcctgcagagcaaacctttg
agtcaccatgatggaaaagcgcatgggcaggactggagctttaagaggagcagagcgagg
ggagaccgtacagggggaggaaggaaaggagaaggaggatctgattcagattctgattca
gattcaggctcatcatcctcggggcgatcaggcagcagcgatgacagcggagagagtgag
gaagagggggaaagagcaggcaaggtgtgtgacgtggatgaagagaatagctctctctcc
atgactcagtctcaggatggagttccaccccctgatcctctcagagtggactggcccaag
gaccgagtgttgatcaaccggttggacaatttgtgttcgctggtggtgactggtcagtgg
ccctcggggcggaggtatatgcctgaggctcagctaaacccaacctcagagctggcggga
gaagagatgtcctacacaagggttgtccgtaaacctagcagcatgcctggtgcccctgga
gcagaaggagaagatggagagttcactgtcaaactccttaaggaggaggggctgaaactg
accttctccaagcaggccctgatgcccaacgggtcagggggggagagcagcagccgcaag
aggcgcaaggaccaagagttgtcagacccagatggactccttgatccactggagcgcact
cctcgacggagggaccctcccacctggctgaaggagaacccagattatgaggtggaggga
gacatgctggagcttcttgtgaacaggagcaagaggaagaggaggaggagggcagataaa
gctgtgacgggcagtgagaaggtcaaacttattaacatgagaactggaaagaaggttggc
gctgctttctgtccgatgctgcaagatctgagggaatatctagaggagaatcccgacagc
gctgtagcacctgagtggtcggaaactgttcggaactctggcttcctgccggagaccttc
ttccaccggctgctgaccgagcactcggagatccccaagaaaagccgacgccgccatcat
caccaccaccaccaccatcatcaccaccacactccagagcccgcccctgaagaccccagc
ctggacggagttgaagaagagactctggtctccgacggagcctacatgatggacgaggag
gacctggagacctcccaccacttcctcaccagtccagactttgatgttaaaatggtgggt
ggcgacagcatttcccaaggtgactatgacagctcggatcaagaagcgttattggacgat
gtcatcatagcacagaaggactctgactcctcgtcaagctcagaggattga
DBGET
integrated database retrieval system
