Scophthalmus maximus (turbot): 118311346
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Entry
118311346 CDS
T09850
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118311346
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118311346
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
118311346
NCBI-ProteinID:
XP_035491018
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Position
5:complement(15212067..15240229)
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AA seq
1150 aa
AA seq
DB search
MKRTAVGGSGCSSRVSAPKAVVSKCTRSNSSHNCLDSGSSGSSGSSGSSGARSGEQPGVA
SNVVMDETDDGEEESKFQHPRLRRAGGGGGSGGGGGGGGGGGSIRMKNFTPGGGAASSAS
RRNSNKEPCLTHTEDAPAAPRPSAASRATDTQTPCPGDAALRGEASQASGEEASESAVAL
EVLNVPAGDARSSVAPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAEDGGSA
KRGACNSTTGSMDGSVTPGGSLAGGHAGESGAPEKKDSRVSFSNAPSRKASSSLHGPTQT
QQPRNSVTFQKPEDGPPIVPAEDAEPQGSQASFMQRQFSSMLQPGVNKFSLRMYGSQKAV
EREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTTPWIIFNV
VSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIVDFVSSIPVDYIFLIVE
KGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFN
LIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSELYSFAVFKAMSHMLCIG
YGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF
HKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCRKLVASMPLFANAE
PNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVITKGTLAMKLSDGSYFGE
ICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNST
LMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVKLVDLQRPRAMSMTPSIGGIFAPPGQP
QTGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFQVMQNMSSPVSMSPLQSQPP
QTFGGAFGSAISSPPVQSPLAASGRTFQYMASAGPSGSQLSLVQHHAPSPTQTQHRPASH
KSTHSLHTGSLSQDSRALSASQLSLPQEGTTQAVSAAPSPSPSTRTSNTSIGPPQPPHPG
LPGSSGVGRPAGAQSRVAFASTPPPGGPAGMGAVAAAPGSGPPDSGVPKKDSIVSLPELD
SARSRLSSNL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggacggcggtgggtggcagtggctgcagcagccgcgtcagcgcacccaaggct
gtcgtttccaaatgcacaagaagcaacagcagccacaactgtctggactccggctcctcc
ggctcctccggctcctccggctcctccggcgcacggagcggtgagcagcccggcgtggcg
agcaacgtcgtgatggacgagacggatgacggagaagaggagtccaagtttcagcatccg
cggttgcgccgagccggcggcggtggcggaagtggaggaggaggaggaggaggaggagga
ggaggcagtatcaggatgaagaactttacgccaggagggggagccgcgtcctcggcttcc
aggaggaactccaacaaggagccctgccttacgcacacagaggacgctcccgccgcccca
cggccctccgctgcctccagagccaccgacacccagacaccctgtccgggcgatgctgcc
ctacgcggcgaggccagccaagcatctggggaggaggcgtccgaatcagcggtcgcgcta
gaggttttaaacgtgccagcgggtgatgctcgcagcagcgtcgctccaatttccagcatg
aaatgcaacaaaaacggagaatgcaggagggactcgggtaccgggagcctgcgctcaatc
atctccaagcaggagaagcagacaggggggtcggggagggccgaggacggagggagcgcc
aagcgcggagcctgtaactcgaccaccggcagcatggacggctcggtcacaccaggcggg
tccctggccggcgggcacgcaggggagagcggcgcccccgagaaaaaggactccagggtg
tccttctccaacgcgccaagccggaaagcctcgtcctcgctgcacggcccgacccagacc
cagcagcccaggaactctgtcactttccagaagccggaggatggaccgccgattgtgccc
gccgaggacgcggaaccccagggcagccaggccagcttcatgcagcggcagttcagcagt
atgctgcagccgggagttaacaaattctccttacgcatgtacgggagtcaaaaggcggtg
gagcgagagcaggagagggtcaagtcagctgggaactggattatacacccgtacagcgat
ttcaggttctactgggatttcacaatgctgctgttcatggtgggcaacctgatcatcatc
cccgttggcatcactttcttcaaggacgagaccactacgccctggatcatctttaacgtg
gtctctgacactttcttcctcatggacctggtgctcaactttcgcactggaatcatcatt
gaggacaactcagacatcattttggaccctaaaaccattaagaagaagtacctaaagact
tggttcattgtggactttgtatcctccatcccagtggattacatattcctcatagtggag
aagggaatcgactcggaggtgtacaagaccgcccgggccctgaggatcgtccgcttcacc
aagatcctaagtcttctgaggctactgaggctctccagattaatacgatatattcaccaa
tgggaggagatcttccatatgacctatgacctggctagtgcggtgatgcgaatctttaac
ctgattggtatgatgctgctactgtgtcactgggacggctgcctacagttcctggttcca
atgctgcaggacttcccctcagactgctgggtgtctctcaacaagatggagaatgatacg
tggtcagagctgtactccttcgctgtattcaaggcaatgagccacatgctgtgcatcggt
tatggtcggcaggccccggaaagtctatcagatatctggctcaccatgctgagcatgatt
gtaggagctacatgctatgctgtttttattggccatgcgacagctctcatccagtccctg
gactcctccagacggcagtatcaggaaaagtacaaacaagtggagcagtatatgtccttc
cacaagctgcctgccgacttccgacagaagatccatgactattatgagcacagataccag
ggcaagatgtttgatgaggagagcatcctgggagaactcagtgagcctctcagagaggaa
attgtcaacttcaactgtcgtaagctggtggcgtccatgccgctgtttgccaatgcggag
cctaacttcgtgacagccatgttgaccaagctgcgttttgaggtgttccagcctcatgat
tacataataagagagggcacaataggaaagaaaatgtacttcatccagcatggagtctgc
agcgttatcaccaaaggcacccttgcaatgaaactctctgacggctcttattttggagag
atctgtttattgacgaggggtcgtcgaacagccagcgtgcgggcggagacatactgtcgt
ctctactctctgtctgttgaccactttaatgaggtgctggaagaataccccatgatgaga
cgagcctttgagactgttgccatcgaccgtctagaccgcataggtaaaaagaactccacc
ctgatgcacaaggttcagcatgatctcaactctggcgtcttcaacaaccgggagaatgag
atgatacaggagattgtgaagtacgaccgtgagatggtgaagctggtggacctgcagcgg
ccgcgagccatgtccatgaccccttccattggtggtatctttgctccccctggacagcca
cagacgggctctgctattgccaccctccagcaggctgtggccatgagcttctgtcctcag
atggcaagtccgttggtgggtccaggcacccttcagtctccccgtatggtgcgaaggttt
caggtgatgcagaatatgtccagcccagtgtccatgtcgccacttcagtctcaaccacct
cagacgttcggaggggcgtttggatctgcaatctccagccctcctgtccaaagtccactc
gcagcttcaggacggactttccagtacatggcgagcgcaggaccctctgggtcccagttg
tccctagtacagcaccatgcacccagccccacacagacccagcacaggcctgcctcacac
aaaagcacccactcccttcatacaggcagcttgagccaggatagccgggccctgtctgcc
tcccagctttcactcccccaggagggaacaacacaagctgtctctgcagcccccagcccg
tcgccctctacccgcacctccaacacctccatcggcccccctcagccccctcatcctggc
ctgcccgggtcctcaggggtggggagaccggcaggagctcaatcgagggttgcttttgcc
tccacaccgcctcctggtggacctgctgggatgggggcagtagcagcagctcctggatca
ggacctccagactctggagttcccaagaaagattcaatcgtcagcctaccagagctagac
tctgccagatcccggctgtcttccaacttgtga
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