Scophthalmus maximus (turbot): 118311356
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Entry
118311356 CDS
T09850
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118311356 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118311356 (tent4a)
03016 Transfer RNA biogenesis [BR:
smau03016
]
118311356 (tent4a)
Enzymes [BR:
smau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
118311356 (tent4a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
118311356 (tent4a)
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
118311356 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
118311356
NCBI-ProteinID:
XP_035491045
LinkDB
All DBs
Position
5:complement(2250859..2267658)
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AA seq
814 aa
AA seq
DB search
MDPRIAWIQPEQKGPANALWMHVWETSQGVRTLSAQQQLHNQNHNQCVNYAALDVLKNVA
TAVAAGKIVCGGNGNVTASRGSHRGIMHGTTGVNGTAMSTVGVALSNGNARNSFAAANAA
GAGEGRAPAQKTGSVSSSSSSQESGADSPPSGCSLERTMGGNVSGNVNKNVGGANLLFGL
DNNVNLYHQHLHHHRHIQEHPAFSLQQICVKRHQVHPSVPATHTHNHHPGRRKSDNKAST
YGMNYLLSNCTNGNYAGTWTPWKTRTYNPGVLGLHEEVMDFYNFMSPRREEAAMRKEVVN
RIEMVIKELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQELEQALRKHNVAEP
FSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAASFIKDYVKKYPVLPYMIFVLKQ
FLLQRDLNEVFTGGISSYSLILMVISFLQLHPRIDARNPTENLGVLLIEFFELYGRHFNY
LKTGIRIKNGGAYIPKDEIMKAMTNGYRPSMICIEDPLLPGNDVGRGSYGAMHVKQVFDY
AYTVLSHAVSPLARSYPNKDCESTLGRIIRLTQEVIDYREWIIKKWGGRDQARTDNRVSP
PKEPVSEQEPGCSPEEQQRDSVSPHSADSPMSISSPQQHSSASSVSSLSGSDNDSDSTLP
CPVPPPPLPPYPSFPPLGLALPPGLNMGAGKPGMGGHHLLMHPGSQARVSLPGGLTMHSI
PGRRVCIDTGLPPFYHMPPPAHAHAPAPSSPQPPPSPHSSHTHKNATKFNVKGFHNPPLV
NNPVLANRGHTHTQYHRNTWRRRKRDSLPVSLSR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaggatagcttggattcagcccgaacagaaaggacctgcgaacgccttgtgg
atgcacgtctgggagacctctcagggagtacgcacgctctccgcgcagcagcagctccac
aaccagaaccacaaccagtgtgtgaactacgccgcgttggatgtgctgaaaaatgtggcg
accgcggtggcagcgggcaagatcgtctgcggcggcaacggcaacgttaccgcgagtcgg
ggcagccatcgcggcatcatgcacggcactaccggcgtcaacggcactgcgatgtccacg
gtgggtgtagcgctatccaacgggaacgcgcggaactctttcgcggcggcgaacgccgcc
ggagcgggcgagggcagagccccggctcagaagacgggatccgtctcctcgtcgtcctcc
tcacaggagtccggggcggacagccccccttccggctgctcacttgagaggactatgggt
ggaaatgtatcgggcaacgtgaataaaaacgtcgggggtgccaatctgctcttcggcttg
gacaataatgtcaacctctaccaccaacacctccaccaccaccgtcacatacaggagcac
ccggcgttcagtctccagcagatctgcgtgaagcgtcaccaggttcacccctccgtaccc
gcaacccacacacacaaccaccacccgggccggaggaaaagcgacaacaaggcgagcacc
tatgggatgaactacttgctatcgaactgcactaacggcaactatgcgggcacttggacg
ccctggaagacgcggacgtacaaccccggggtcctcggactccacgaggaggtgatggac
ttctacaacttcatgtcccctcggcgagaggaagcagctatgaggaaggaggtggtgaac
cggatagagatggtcattaaggagctgtggcccactgcagatgtccaaatatttggcagc
ttcagcacaggactctaccttccaacaagtgacattgacctggtggtgtttgggaagtgg
gagcgtcccccactgcaagagctagaacaagctcttcgcaaacataacgtggcggaaccc
ttctccatcaaagtgctggacaaggctacagtgccaatcatcaagctgacagaccaggaa
actgaggtgaaggtggacatcagcttcaatgtggagaccggggtcaaggcggcgagcttc
attaaagactacgtaaagaagtatccagtgctgccttacatgatctttgtcctgaagcag
ttcctgctgcagagagacctgaacgaagttttcaccgggggcatcagctcgtacagcctc
atcctcatggtcatcagcttcctacagctccatcctcgcattgacgccaggaaccccact
gagaacttgggcgtcctgctgattgagttctttgagttgtacggccgccatttcaactac
ttgaaaacagggatccgcatcaaaaatggaggcgcatacatacccaaagacgaaatcatg
aaggccatgacgaacggatacaggccgtccatgatctgcatagaggacccactgctccca
ggtaacgatgtagggaggggctcctatggtgccatgcacgtcaagcaggtgtttgactac
gcttacactgtcctgagtcatgccgtgtcaccgctcgcgcgctcgtatcccaacaaagac
tgcgaaagcaccttgggcagaataatcaggttgacccaggaagtgatcgactacagggaa
tggatcattaagaagtggggggggagggatcaggcgcggacagacaatagagtctcgcct
cccaaggagcctgtgtcggagcaggagcccggctgcagcccggaggagcagcagagggac
tcggtgtcaccgcacagcgcagactcccccatgtccatctccagccctcagcagcactcg
tcagcctcctcggtctcctcactgtccggatcagacaatgactccgattcgacgttgcca
tgtccggtccctccgccacccctgccgccgtacccgtctttcccacccctgggcctcgct
ttgccacctggactcaacatgggcgctggcaagcccggcatggggggacaccatctgctc
atgcatccaggctcacaggctcgcgtgtcactccccggtggtctaaccatgcactccata
cctggcagacgggtgtgtatagacaccgggcttccccccttctaccacatgcccccccca
gcccacgctcatgcccctgctccctccagcccccagcctccgcccagcccccactccagc
cacacacacaagaatgcaactaagttcaatgtgaagggctttcacaacccaccactggtc
aacaaccctgttctggctaaccgcggacacacgcacacgcagtatcaccgcaacacttgg
cgacgcaggaagagggacagcctaccggttagcctcagcagatag
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