Scophthalmus maximus (turbot): 118311430
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Entry
118311430 CDS
T09850
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118311430 (tnn)
04518 Integrin signaling
118311430 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118311430 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118311430 (tnn)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118311430 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Fn3_VIN3
DUF460
DUF7949
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
118311430
NCBI-ProteinID:
XP_035491185
LinkDB
All DBs
Position
5:16892314..16921387
Genome browser
AA seq
1120 aa
AA seq
DB search
MTTRLLWRALGLSALLCTISHFSRADNQPGPSAPEQGVTFSHVYKIDIPGSSSCKLERMS
TQEETGLQTDTTTNGENDIIFRHNIKLQTPKCDCEESESFKSLMYRVNGLEEEVNYLKTQ
CTQGCCGKGGAAGVDTSCSDHGTYQHDACSCLCDPGWEGPDCSVSSCPDDCNDNGRCVDG
KCVCHQGYRGDDCSQLTCPGDCNDKGHCVDGKCVCFPNFAGEDCSVAKCPNDCIGNGRCV
DGRCICDEGFYGDDCSLVFGPQGLRLVQVTDVSLLVEWESARGAEYYILTYHPKDDKSAP
DQVRIPNTENSYLITGLTPGVTYIVQVYAVIKEIQSEADKIEATTDVSAIDGIQVLGQTE
VSIQVDWKNPPAEVDHFRLTHTDPEGQEEELNVQSSQEARTKHTIVGLHPGTEYLISVQA
IKGTTEGKQSSVTGATDIDAPTNLDTTKVTEDTATVSWDRVKAEIEGYMLSYTSAAGSSP
EIPVGRDSTSYRLIGLRPGVLHTVYIWAFNGDKVSRKSSTEAETELDAPTNVLARDETES
SFRVSWDQTHAEIDGYVLTYSSSEGSSAEIPVGSDSNGHLLTGLKPGVLYTVYVWAVKGD
KASRKISTQAATELDAPANLSARDETESSFSVSWDPVQAEIDGYVLTYSSSEGSSGEIPV
GPDSTSYSLTGLRPGVLYTVYIWAIKGNKVSRKTSTQSQTELDAPANLLARDETESSFRV
SWDPVQAEIDGYTLTYSSSEGSSEEIPIAPDSTSYSLTGLRPAVLYTVYIWAFKGEKASM
KISTKVETDIDAPKDLKATDVTVESASLTWIPPLADIEGYILTYRDEDGNMETVEKQPGA
GVSSFAVSSLEMGKTYIVTIIAYRGNKRSKVVETIFKTVGLSYPFPMDCVQIMKNGNKKS
GIYTAYIYNDRSKPIEVYCDMDTDGGGWLVLQRRTTGRLDFMKRWRQYIAGFGNMTDEFW
IGLDKIYELTNTPTQYELRFDLGVGSERAYAVYDNFKIAPVKQKFKLTIGTYRGTAGDAM
TYHQGRPWTTVDSDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDTRHSLGVNWEPWKG
HLMSLDFTEMKIRPVGALSSRKRRSALPREKSRNTNLQKK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacaactagactcctgtggagggccctgggcctgtcggccctactctgcaccatctca
cacttcagccgcgccgacaaccagccaggcccctcagccccagagcagggagtcaccttc
agccacgtctataaaatcgacatcccaggaagctccagctgcaaactagaacgcatgtca
acccaggaggaaacaggtctgcagacagacaccactacgaatggagagaatgatataatc
ttcagacacaacatcaagctgcagacgcccaagtgtgactgtgaggagtctgagagtttc
aagtccttgatgtacagggtcaatgggctggaagaagaagtcaactacctaaagacccag
tgcactcagggctgttgtggaaaaggcggtgctgcaggtgtggacacgagctgtagtgac
catggtacctaccagcacgacgcctgcagttgcctctgcgacccaggatgggaaggccca
gattgctcagtgtcctcctgcccagatgattgtaatgacaatggccgctgtgtggacggg
aagtgtgtgtgccaccagggctacaggggagacgactgcagccagctgacgtgtccaggc
gattgcaacgacaagggacactgtgtggatggaaagtgtgtgtgtttcccgaacttcgct
ggtgaggactgcagcgtggccaagtgtcccaacgactgcatcggcaacggccggtgtgtg
gacggccggtgcatctgtgatgaaggcttttatggagacgactgttcattagtgtttggc
cctcagggtctacggttggtgcaggtgactgacgtctccctcctggtcgagtgggagtcc
gctcgtggggcagaatattacattttgacttatcatcccaaagatgataagagtgccccg
gatcaggtccggattcccaacacagagaactcctacctcatcacaggactgacccctggg
gtcacttacattgtccaggtgtacgcagtcatcaaagaaatccaaagtgaagcggacaag
attgaggctacgacagatgtctctgctattgatggtatccaagttcttggccagacagaa
gtctctatccaggtggactggaagaacccaccagctgaagtggatcacttcaggctcaca
cacactgacccagaaggacaggaggaggagctgaacgtacagagtagccaggaggcacga
accaaacacactattgtgggtctgcatccaggaacagagtacctgatctcagtgcaggcc
atcaaaggaacaactgaggggaaacagtcgtctgtcactggtgccacagacattgatgcc
ccgacaaaccttgacaccaccaaggtaacagaggacactgcaacggtttcatgggatcgg
gtcaaggcagaaattgagggctacatgctgagctacacctctgctgcgggctccagtcca
gaaatccctgtaggccgtgacagcacctcatacaggctgattggcttgaggcccggagtc
ctccacacagtctacatctgggccttcaacggagacaaagtcagcaggaagagttcaaca
gaagctgaaacagagctggatgcccctactaacgtcttggcccgtgatgagacagagtcc
agtttcagggtgtcctgggatcaaactcatgctgaaattgatggctacgtcctgacctac
agctcttctgagggctcaagtgcagaaatcccagttggatctgacagtaatggtcatttg
ctgactggcctgaagcctggggtcctgtacacagtctacgtctgggccgtcaagggggac
aaagccagcaggaagatctcaacacaagctgcgacagaactggatgctcctgctaacctc
tcagcccgagatgagacagagtccagcttcagcgtgtcctgggatccggtccaggcagag
attgatggctacgtcctgacctacagctcgtctgaaggatctagtggggaaatcccagtt
gggcctgacagcacctcttacagtctgactggcttaaggccgggggtcctctacactgtg
tacatctgggccatcaaggggaacaaagtcagcaggaagacctcaacacaatcacagaca
gaactggatgctcctgctaacctcttagctcgagatgagacagagtccagcttcagggtg
tcctgggatccggtccaggcagaaattgatggctacaccctgacctacagctcgtctgaa
ggatctagtgaagaaatcccaattgcgcctgacagcacctcttacagtctgactggcctg
aggcctgcagtcctctacactgtgtacatctgggctttcaagggagaaaaagccagcatg
aagatctctacgaaagttgagacagatatcgatgcccccaaggacctgaaggcaacggat
gtgacagtggagtctgcttctctgacctggattcctcctctggctgacattgagggctac
atcctcacctacagagatgaggatggcaacatggagactgttgaaaagcagcctggagcc
ggcgtgagcagttttgctgtatccagcctggagatggggaagacgtacattgtcaccatc
attgcctacaggggcaacaagaggagcaaggtggtggagaccatctttaaaacagtcggc
ctctcataccccttccccatggactgtgttcagatcatgaagaatggcaacaagaagagc
ggcatctacaccgcctacatctacaatgaccgctcgaaaccaattgaggtttactgcgac
atggacactgatggaggtggctggctggtgctccagcgccgtaccactggcaggctggac
ttcatgaaacgctggaggcagtacatagcagggtttggcaacatgactgacgagttctgg
atcggtctggataagatatatgagctcaccaacactcccactcagtatgagctgcggttt
gacctgggcgtgggctcagagagggcctacgctgtgtatgacaactttaagattgctcca
gtcaagcagaagttcaaactcaccattggcacataccgtgggacagcaggcgatgctatg
acctaccaccaaggccgaccctggactactgttgactccgataatgacatcgcactgggt
aactgtgccctgacccaccgtggcgcctggtggtacaagaactgtcacctggcaaacctc
aacggcaaatggggagacaccagacacagtttgggagtgaattgggagccatggaagggc
cacctgatgtccctcgacttcaccgagatgaagatccgacccgtgggagccttgtccagc
aggaagaggcgatcggcgttgcccagggagaagagcagaaacacaaacctccagaagaaa
tag
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