Scophthalmus maximus (turbot): 118311444
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Entry
118311444 CDS
T09850
Symbol
clstn2a
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118311444 (clstn2a)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Cadherin related
118311444 (clstn2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
SpoIIIAH
Chordopox_A13L
V_ATPase_I
SMP_2
DUF6479
Motif
Other DBs
NCBI-GeneID:
118311444
NCBI-ProteinID:
XP_035491219
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Position
5:complement(14169848..14280895)
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AA seq
943 aa
AA seq
DB search
MRTSGLCFWLLCLVWGRSRAVGGKVNKHKPWIETSYHGVITENMDTVLLDPPLVALDKDA
PVPFAGEICAFKIYGQDAPFEAVVLNRTSGEGVLRASGPVDCESQKEYTFIIQAYDCGAG
PSGADWKKSHKAVVHIQVDDINEFCPVFREPLYKASVTEGKIYDSILQVEAWDQDCSPQY
SQICNYEIVTSGTPFAIDRNGNIRNTERLSYDKQQSYKIMVTAFDCGQKKAKDDVAVHID
VKPVCKPGWQGWNKRVDYEPGTGSKQLFPKMHLETCGGPLSGVRAMVELQTNHIGKGCDR
ETYSEKSLQKLCGAASGSTDLLPAPSPSTNWTASLLTDSGRDSDLIYRFDGRQAANVPDH
VVPQNLTDQFTIATWMKHGPSPGLRAEKETLLCNSDKTETNRHHYSLYVHNCRLVFLLRR
DFTQVDTFRPAEFHWKLEQICDKEWHYYVINVEFPAVTLFVDGVTYEPYLVTDDWPIHTS
KIDTQLTVGACWQGGEVATPRFTQYFHGSLSGLTIRPGRIETQKVISCLQACKEGLDINS
LESLAKDIKFHFNPAQSVLVVEGEDVDSINTAMTKVSYINSRQFPTAGLRRLHITTTVQC
FGEDTCLSIPDVKAVVMVLPPSEPRITITGSNRLVRPAADLQGPLGVAPFKELHITSTVM
KGDSFGGFRRPGVMEVMHNLDYCDILLIGEELNPDRESLEIRHSALLGKHLDATNSTSGI
SIYGVDSMAHYEQALRQVRYRSWRPATLSERRFRLTCSELNGRYTSNEFNLEVSVLHRSA
PVEHVNHIAAQPQYMRPVHHPLMIHTLNSHMSGTAPPAATVVIVVCIAALVVIVVIGVYR
IHTTHQEESREDEDEVKDPEEWDNSALTITVNPMENIRGAKAVDEEIKEKNREEEEEDEE
QGLTSAESDNSDEDEEEEEEEREEVRKRKQRAKLEWDSSSITY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcggacatccgggctctgtttctggctgctgtgcctcgtctggggccgctcccgcgct
gtcggcggaaaagtgaacaagcacaagccgtggatagagacatcttaccacggtgtgatc
acggagaacatggacacggtgctgctggacccccctctggtggcgctggacaaggacgcc
ccggttccctttgctggggagatttgtgcctttaagatctatggtcaggatgccccgttt
gaggcggtggtgttgaatcgcacatcgggagagggcgtcctgagggccagtggccctgtg
gactgtgagagccagaaagagtacaccttcataatccaggcctacgactgcggggccgga
cccagcggggccgactggaagaaatcacacaaggcggtggttcacatccaggtagatgac
atcaacgagttctgtcctgtgtttcgggagcctctgtacaaggcgtcggttacagaaggc
aagatatatgacagcattttgcaggtggaagcatgggaccaggactgttccccacaatac
agccaaatctgcaactatgagattgtcacctcagggacgcctttcgccatcgaccgcaat
ggaaacatcagaaatacagagcgactgagctatgacaagcagcagagctacaagatcatg
gtgacggcctttgactgtggtcagaagaaagcaaaggacgatgtggctgtgcatattgat
gtcaagcccgtctgcaaaccaggatggcaaggttggaacaagcgtgtggactatgaacca
ggcactgggagcaagcagctgttccccaagatgcacctggaaacctgcggcggtcccctg
tctggcgtgagggcgatggtggagctgcagaccaatcacatcgggaagggctgcgaccgt
gaaacgtactccgaaaagtctctgcaaaaactctgtggtgcagcatctggcagcaccgac
ctcctccctgcccccagcccctccacaaactggacggcgtctctgctgactgacagtggg
cgagacagcgacctcatctacagattcgacgggcgtcaggctgccaatgttccagatcac
gtggtgccccaaaacctaacagaccagttcaccatagcaacctggatgaagcacgggccc
agtccgggactcagggctgagaaggaaaccttgctatgcaactctgacaagaccgagacg
aaccgccaccattactctctgtatgttcacaactgccgcctggtgttcctgctcagaaga
gatttcacccaggtcgacactttcagacctgccgagttccactggaaactggagcagatc
tgtgacaaggaatggcactattatgtgatcaatgtggaatttcctgcagtcacactattt
gtggatggtgtgacctatgagccctacctggtgacggatgactggccgatccacacctca
aagattgatacacagctgactgtgggtgcctgctggcaaggcggagaggtagcaacccca
aggttcacccagtatttccatggcagcctgtcgggtctgacaatccgaccaggccgcatt
gaaacgcagaaggttatctcctgtttgcaggcctgtaaagaaggacttgatatcaactcc
ctcgaaagcctagctaaggacatcaagttccattttaaccctgcgcagtctgtgctggtg
gtggaaggagaggatgtggacagcatcaacacggccatgaccaaggtctcctacatcaac
tctcgccagttccccacagcgggcctgcggcgattacacatcaccaccacagtacagtgt
ttcggggaggacacgtgtctctccatcccggacgtcaaggcggtcgtcatggtgctgccg
cccagtgaaccgaggatcacgattacaggatctaatcgactggtcaggcctgccgccgac
ctgcagggcccgctgggtgtggcccccttcaaagagcttcacatcaccagcaccgtgatg
aagggagacagcttcggtggattccgtaggccaggtgtgatggaggtgatgcataacctg
gactactgtgacatcctgctcattggagaggaactgaaccctgacagagagagtctggag
attcgtcacagcgccttgttgggaaaacacctggacgccaccaactccacctctggaatt
tcaatatatggtgtggactccatggcccactatgagcaggcactgagacaggttcgctac
aggagctggcgacctgccaccctgagtgagagaaggttcaggctcacctgctctgaactc
aacgggcgttacaccagcaacgagttcaatctggaggtcagcgttcttcaccgctcggcg
cctgtggagcacgtcaatcatattgcagcccagcctcagtacatgagacctgtccatcac
ccactcatgatacacactctcaactcacacatgtcaggaacagcaccaccagcagccaca
gtagtaattgtggtttgtatcgctgccctggttgtgattgtggtgatcggggtgtacagg
atccacaccactcaccaggaggagtccagagaggacgaggacgaggtgaaagaccctgag
gaatgggacaactccgccctcaccatcaccgtcaaccccatggagaacataagaggagct
aaggctgtggatgaggagattaaagaaaagaaccgggaggaggaggaggaggatgaagaa
caaggattgacaagtgctgagtcagacaacagtgatgaagatgaagaggaggaggaggaa
gagagagaagaagttaggaagaggaagcaaagggcaaaacttgagtgggacagttcctcc
ataacatactga
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