KEGG   Scophthalmus maximus (turbot): 118311572
Entry
118311572         CDS       T09850                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smau03036]
    118311572 (kdm4ab)
Enzymes [BR:smau01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118311572 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118311572 (kdm4ab)
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118311572 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 PHD Tudor_5 DUF7141 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 118311572
NCBI-ProteinID: XP_035491461
LinkDB
Position
5:complement(13614691..13630491)
AA seq 1191 aa
MASDVVSQNHGSKGIMTFYPTAEQFKNFSRYIAYVESQGAHKAGLAKIVPPKEWKPRGSY
DDIDELVIPAPIQQVVTGQSGLFTQYNIQKKSMTVREFRKIANSDKFCSPHYDDFEELER
KYWKNVTFNPPIYGADVNGSLYDPEIKEWNISHLDTILDTVESESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGKRLERLAQGFFPGSSQNCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQAVLCSCRKDMVKISMDVFVKKFQPDRYEQWLAGRDVLPINHSRPTPEAKEFLGDSVN
DIPSNSNSCSVEICGEDGERKSTTQRIETKRHRVCLEVPEEVVPKDEDDEDEEHYGKRPR
LSLIPPRTTSQDGKRNKGPPKLVVTPTKLTLMDPFHRGLTQSNSDGGRPHYTKTRAPAIS
SQSHARNGHLSVSVAPSWAEASAQPSRKMGVASLLFHRTLSPKDTLQVHSYTLEKQRQPH
TQLQVHSYAREHQPRHLQHKTHPQPRTQVQPSSPAPSCETTELQPESKFILTKVATAESE
AKSPEKRDQEEDKPQMSMSVEALPESEEPEVQPTSRSASLQVQPQPQELDNTGKETPKSN
KRKSNQCPLADSGIVILKDTVPLQEPNHSETKVIAQSHHSLLQQVSEEQSYCKSVVKKQQ
QHELLRKLPRHHPLIREVHSDEDMCVNVEFEQEEKEEWAKPLSQLWQCRPYNPEAEREYN
KSMGQHAPFCSICLIFHTYHQSDSSSGSSTLTLVNRPGGRQWSKPLIPEMCFNTQTSKTN
ESEEGQLSNPHIGEDGTSQLVSCAQCCVRVHTSCYGVSGDEAELNDWLCARCEADATTED
CCLCSLRGGALQRANNDKWVHVLCAITVLEACFVNVTERSPIDLSAIPLPRFRLKCVYCR
KRMKREVTGCCVQCSHGRCSTAFHPTCAQAAGILMHPDDWPFVVFVTCHRHRTPILPERN
KASMRELAVGQKVICKYRNTRYYHSDVVELTTATFYEVVFDDGSYSDNLLPEDIENRDCV
RLGPPTGGDAVQVRWTDGLIYGAKFVASHSIPMYLVEFEDGSQITVKREDIYTLDEDLPK
RVKSRMSVASDMRFELFAQKDVKQTSKRQRVINSRYREDFVEPVIYRAIME
NT seq 3576 nt   +upstreamnt  +downstreamnt
atggcgtccgacgtggtttcccaaaaccatggttccaaggggatcatgactttttacccc
actgctgagcaattcaagaacttcagccgctacattgcatatgtggagtcccagggagca
cacaaggcaggcctggctaaaattgtcccaccaaaggaatggaagcctagaggatcctat
gatgacatcgatgagttggtgatacctgcacccatccagcaggtggtgacaggccagtcg
ggccttttcacgcagtacaacattcagaagaagtctatgaccgtcagagagttccgcaag
attgccaacagtgacaagttctgcagtccgcattatgatgactttgaggagctggaaagg
aagtactggaagaatgtgacgttcaaccctccaatatatggagcagatgttaatggaagc
ctgtatgaccctgaaatcaaagagtggaacatttcccacctggacactattttggatacc
gttgaaagtgagagcggcatcactattgagggtgttaatacaccctacttgtattttggt
atgtggaagaccacctttgcatggcacactgaggacatggacctctacagtattaactac
ttgcactttggagagcccaaatcatggtactgtgttcctccagagcatgggaagagattg
gagcgtctggctcaaggcttctttcctggtagttcccaaaattgtgaggctttcttgagg
cacaagatgactctcatctctccgtctatcctgaagaaatatggcattccgtttgaaaag
attactcaggaggctggtgagttcatggttactttcccctacgcctaccatgctggcttc
aaccacggcttcaactgtgctgagtctaccaactttgcgacagagagatggatcgaatat
ggcaagcaagccgttttgtgctcatgccgcaaggacatggtgaaaatttccatggatgta
tttgtgaagaagttccagccagatcgctacgaacagtggctggcagggcgagatgtgttg
cccatcaaccactcacgacccactccggaggctaaggagttccttggggattctgtaaat
gacatcccaagcaacagtaacagttgctctgtggagatctgtggagaggacggggagcgg
aagagcactacacagaggatagagaccaagagacacagggtgtgtctggaggtacctgag
gaggttgttcctaaggatgaagatgatgaagatgaggagcattacgggaagcgtcccagg
ctaagcctcatacccccacgtactacatcacaagatggcaagaggaataaaggcccacca
aaactggttgtcacgcctaccaagctcactttaatggatccgtttcacagaggcttgacc
caaagtaacagcgatggaggccgtcctcattataccaagacccgtgcacctgccatctct
tctcagtctcatgccagaaatggacatctgtctgtgtcagtggcgccttcttgggcagaa
gcttctgcacagccatcccgcaaaatgggggtggccagcctgctcttccacaggacactg
agtcctaaagacactcttcaggtgcacagctacactctagaaaagcagcggcaaccgcac
acacagctgcaggtgcacagctacgccagagagcatcaaccccgtcatctccagcacaaa
acccacccacagccccgcacacaggtacagccttcgtctccggcaccaagctgtgaaacg
acagagctacagcccgaatctaaattcatccttaccaaagtagcaacggctgaatctgaa
gcaaagagtccggagaagcgggaccaagaggaggacaaacctcaaatgtcaatgtccgtt
gaggctctgccggaatcggaggagcctgaagttcagcccaccagcaggtctgcttcccta
caggttcaaccacaacctcaagagttggacaacacagggaaagaaactcccaagagcaac
aagcgaaagagtaaccaatgcccccttgcggatagtggcattgtcatcctgaaagacacc
gttcctctccaggaaccaaatcacagtgagacgaaggtgatcgctcagagtcatcactca
ttgctccagcaggtatcagaagagcagtcatactgcaagtcagtggtgaagaagcaacag
cagcatgaactgctccgtaagctgcctcgccaccaccctctgatcagagaggtgcacagc
gacgaagacatgtgtgtaaatgtggagtttgaacaagaggagaaagaggagtgggcgaag
ccgctaagccagctgtggcagtgtcgaccttataaccctgaggcagagagggagtacaac
aaaagcatggggcagcacgcccccttctgctccatctgcctcatctttcatacttaccat
caatccgactccagtagtggaagttctactttgacgttagtgaaccgtccagggggccgc
cagtggtccaaacctctcatcccagaaatgtgtttcaacacccaaaccagcaagacgaac
gagagcgaggagggacagctgtctaacccccacatcggagaggacggaaccagccagctc
gtcagctgtgctcagtgctgtgttcgtgtacacaccagttgctatggtgtatccggtgat
gaagcggagctcaatgactggctgtgtgcccgctgtgaggctgatgccaccaccgaggac
tgctgtctgtgttccctgagaggcggcgctctgcagagagccaacaacgacaagtgggtt
catgtgctgtgtgccataactgtgctggaagcttgctttgtcaacgtcaccgagcggagc
cccatcgacctctctgccataccactgccacggttcagactgaagtgtgtgtactgcagg
aaacggatgaagagggaagtgactggctgctgtgtccagtgctcccacggccgctgctcc
acggcgtttcaccccacctgcgctcaggccgctgggatcctcatgcacccggatgactgg
ccattcgtcgtcttcgtcacctgccatagacacagaacgcccatcctacctgagcgcaac
aaggcctccatgcgggagttggcagtggggcagaaggtgatctgtaaatacagaaacacc
cgttattaccacagcgacgtggtggaactgacaacggccaccttctacgaggtggtgttc
gacgacgggtcctacagcgacaacctcctccctgaggacatcgagaaccgtgactgcgtc
cgcctcggtccgcccactggtggtgacgctgttcaagtgcggtggacagatggactgatc
tacggagccaaatttgtagcatcccactccatccccatgtacctggtggagtttgaggat
gggtctcaaatcactgtcaagcgagaggacatctacactctggatgaggatctgcccaaa
cgagtcaagtcacgaatgtcagtggcgtcggacatgcgctttgagctcttcgcgcagaaa
gacgtcaaacagacctccaaaaggcaacgggtcatcaactctcgataccgggaggacttc
gtcgagcccgtcatctaccgggccatcatggagtaa

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