Scophthalmus maximus (turbot): 118311588
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Entry
118311588 CDS
T09850
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118311588 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118311588 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smau04031
]
118311588 (rab42a)
Membrane trafficking [BR:
smau04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
118311588 (rab42a)
GTP-binding proteins [BR:
smau04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
118311588 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
118311588
NCBI-ProteinID:
XP_035491503
UniProt:
A0A2U9BL95
LinkDB
All DBs
Position
5:complement(5048490..5053902)
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AA seq
218 aa
AA seq
DB search
MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDLEPDVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLNKDRRVTRDEAEQLAAALGIRYVETSAKCNSNVDRAFELLTKDIYELMKMGEI
VTRDGWDGVKSGLTAKVLYPGEDEEQLATATAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggacattctgtggcaataccagttccggatcattttgctcggggattccaccgtgggg
aagtcgtcgctgctgaagcgcttcacggacggcatctacagcgatgtggcggacccgacg
gtcggcgtggacttctacgcccgctcgctggacctcgagcccgacgtgaagatcaagctg
cagctgtgggacacggccggccaggagcggttcaggtccatcacaacgtcatactaccgc
aactctgtgggcgggctgctcgttttcgacctcaccaatcgcaagacctttgaccacgtg
agggagtggcacaaggaggtgagtgagcacatcctgccccaccacatggtctacatcctc
atcggccacaagagcgacctcaacaaggaccgcagggtgacccgagatgaggcggagcag
ctggcggcggcactgggaattcgctacgtggagacgtcggccaaatgcaacagcaacgtg
gaccgcgcctttgagctgctgaccaaagacatctacgagctgatgaagatgggggagatc
gtcacccgcgacggatgggatggcgtgaagagcggcctcactgccaaagtcctgtacccg
ggcgaggacgaagagcaactggctacggcaaccgctgaaaagggctgccactgctga
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