Scophthalmus maximus (turbot): 118311759
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Entry
118311759 CDS
T09850
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118311759
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118311759
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
118311759
NCBI-ProteinID:
XP_035491767
EnsemblRapid:
ENSSMAG00025015853
LinkDB
All DBs
Position
5:11225299..11229368
Genome browser
AA seq
1011 aa
AA seq
DB search
MGETGWNGLAVLVCVSLLSLAAVTQGKTVKYQTFEEDAPGTVIGNLAKDISSAASSAGGS
RNNFRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLISFDVVSYSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGANYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQGSYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSLSVDLPEDSPAGSLLLDLNAEDPDEGLNGEVVYGFGHQVPAEIRQLFRVDRK
TGRLTLESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFKLQQAYEDSFMIVSTSP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTAVARDMDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEVMKQLE
LRITASDGGSPPLSGTANVYVRIMDQNDNAPVITQPALNNGSAEVLLPRDAPTGYIITRV
EARDADEGVNSDLSYGLATGEPSVFSVNRATGEIYLNQVLSHDVDETLSVTVTVSDSGRP
ALTSAATLHFLVIAGPPPSDRTVYQSGGADEGHAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRRRRDKGGEDSDSYGEKGTLERGRNHMADNPLLPLHGAGPGAAFDGHSYSSQPGG
FTSAHPGGSDMCSASEDGSEVPCVYDSDSNSKPRGNKQEGYSTLPGYGNGREAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGPVVPPIGGQNGLWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTLSSFNSLPKMASLPCDPNRRDNYYQAQIPKT
VGLQSVYEKVLHREYDYVLVTSPRPVRVQEIGDITIPVYDPTPTHCPNEEA
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacagggtggaacgggctggcggtgctcgtgtgcgtctccttgctaagcctc
gctgctgtcacacaagggaagacggtgaaatatcagacatttgaggaagacgcgccgggg
acggtgattggaaacttggccaaggacatctcctccgccgcctcttccgcgggaggctcc
aggaacaatttcaggatgatgaaacagttcaactcctctttcatccgcctgagggagagc
gacgggcagctgaccatcggggagaggatagaccgggagcgaatctgcaagcacaccctg
cactgcctcatctccttcgacgtggtcagttactccaaagagcagttcaaactcatccac
gtcgaggtggaggtcaaggacatcaacgacaactccccggagttcccccgcaaagagtcg
agtctggagatctccgagaacacggcggtgggcacgcggatcccgctggacttcgccgtg
gacgaggacgtcggggcgaactacatccaaagctaccagatctccgtcaacagccacttt
tcgatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctgatgaag
gagctggaccgggagacgcagggctcttacgcgctggagcttgtggccatggacggcggc
aacccgtcccgcaccgggacgacgcgcatcaacgtcaaggtgaaagactacaacgacaac
agccccgtgttcgacaggaacagcctctccgtggacctgcccgaggactcaccggcgggc
tccctcctgctggacctgaacgccgaggacccggacgagggactgaacggcgaggtggtg
tacgggttcggccaccaggtgcccgcggagatacggcaactcttcagagtggacaggaag
accgggcggctcaccctggagagccccattgactttgagagtaagaacacgtacgagttc
gacgtccaggccaccgacctgggtccgaacccgagcccggccatctgcaaaatagtcgtg
caggtgcaggacgtgaacgacaacgcgccggagatctccatcacccccatgacgtccatc
acggcggggatagcgtacatcacagaggcggcggccagggagagtttcgtggcactggtc
agcacctcggacagagactccggcgccaacggacaggtgcactgcaccctgtacggacac
gaccacttcaaactgcagcaggcgtacgaggacagcttcatgatcgtgagcaccagcccg
ctggaccgggagaagatccccgagtataacctcacggtggtggcggaggacctgggctcc
ccccccttcaggaccatcactcagtacaccatcaggctgacggacgagaacgacaacgct
ccggtgttcagtaagcccgtgtacgaggtggccgtggtggagaacaatgcgcccggggcg
tacatcaccacggcggtggcgcgggacatggacatggggtcaaacgggaaggtcagctac
aaactggcggacacctacttcatgggctctcccatctccaccttcgtgtcgctggacccg
gccagcgggtcgctttacgcgctgcggagcttcaactacgaggtgatgaagcagctggag
ctgcgcatcacggcgagtgacggcggctccccgccactgtccggcaccgcgaacgtctac
gtgaggataatggaccagaacgacaacgcccccgtcatcactcagccggccctgaacaac
ggctccgccgaagtcctcctgccccgggacgcaccgaccggctacatcatcacgcgggtg
gaggcgcgcgacgcggacgagggggtgaactcggacctgtcctacgggctggccaccggc
gagccctccgtgttctccgtcaacagagccaccggcgagatctacctgaatcaggtgctg
agccacgacgtggacgagaccctgagcgtgaccgtgacggtgagcgacagcggacggccc
gcgctcacctccgccgccacgctgcacttcctcgtcatcgcgggccccccgccgagcgac
aggaccgtgtaccagtcgggcggcgcggacgaggggcacgcgcagtgggacctgtcggtg
gtgatcatcgtcgtcctcgcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaaccggcgcaggcgggacaaaggcggggaggacagcgactcgtacggg
gagaagggcacgctggagcggggcaggaaccacatggcggacaacccgcttctccccctc
cacggagccggccctggagccgcctttgatggacactcgtacagcagccagcccggtggg
ttcacctcggctcaccccgggggcagcgacatgtgctcggcctcggaggacggcagcgag
gtgccctgtgtgtatgactcagacagcaacagcaaacccagagggaataaacaggagggc
tactccactctgccaggctatgggaacggaagggaggctgtgaggcccatcaccatctgg
aaggggaactcgtacaccaccatctctgcccgggacccggccttcagtggcaaagacagt
ggcaagggggacagtgacttcaacgacagcgacagcgatgtcagtggagacactggcctg
aagaaagacgggccagtggttccccccataggcggccagaatggtctttgggcttgcacc
agtgagtgtaaggtcctgggtcactcggaccgctgctggagcccctcagcggtgagggcc
aacgcggccccctccccggccccgaccctctcctccttcaacagcctccccaagatggcc
tcgctgccctgcgaccccaaccgcagggacaactactaccaggcccagatccccaaaacc
gtggggctgcagagcgtctatgagaaggtgctgcacagagagtacgactacgtcctggtc
acctcaccccggccggtgagggttcaggagatcggcgacatcaccatccctgtgtacgac
cccactccgactcactgccccaacgaggaggcctaa
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