Scophthalmus maximus (turbot): 118311857
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Entry
118311857 CDS
T09850
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118311857
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118311857
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
CUE
Motif
Other DBs
NCBI-GeneID:
118311857
NCBI-ProteinID:
XP_035491841
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All DBs
Position
1:complement(15935269..15941902)
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AA seq
611 aa
AA seq
DB search
MNEVLPSQSSATDLLEPDSEELQLRVDSFRKLGYSSEEIRSALRKLGLSTDTNSVLGELV
RIRTSTSPFMSSSDGDERRGTGLKDPLLPPSWALGPRITPQLGHQKSSETELRPIVIDGS
NVAMSHGNKEVFSCRGIQLAVNFFLDKGHNAVTVFVPTWRKEQPRPDAPITDQHMLMELE
KRKIVVFTPSRRVGGKRVVCYDDRFIVKLAHESDGVIVSNDTYRDLQGESPEWKKCIEER
LLMYSFVNDKFMPPDDPLGRHGPSLDNLLRKKPLPTEQKRQLCPYDKKCTYGIKCKFYHP
ERTNQSYLSLADELREKAQISAAKEDKNARLSPRQPQPDIGPAHSHPRDANTEVMRDGKR
SSYPSHISENKLLHWEDPRNSSNHMPFSVTGGLCQTDWPAPHSVPNHYYANISHDYLDSG
LGSFESQYSDNSHCLSSSHKLRSQQRNALAGPRHNSHSCGCCSQAMSSTVHRQHHGSLDS
NCQPNYPHVFPPGVPHQRSLPNHLHYSGAPRNQHSYWSVPIQGLPRASSVHSSHSHNSCR
SYEGHEYQSWGRQQPTPAAFDPQRMELRKNLQAIFNPEQVDTVMEMFPHLMDAEKLAAEI
LNLKAQQGIFG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggtacttccgagccagagctcagctacagacctgctggaaccagacagtgag
gagctccagctcagggtggactccttcaggaagctgggttactcttcagaggagatcagg
tccgctctgaggaagctggggctcagcacagacaccaactcggtgctcggagagctggtc
aggatcaggaccagcacttcacccttcatgtccagttctgacggcgatgagagaagagga
acaggactgaaggaccctctgctgccccccagttgggcccttggacccagaatcacaccg
caactggggcatcagaagagttcagaaacagaattgaggcccattgttatcgacggcagc
aatgttgccatgagtcatggcaacaaggaagtgttctcttgccgaggcatccagctggcg
gtgaattttttcctggataaaggtcataatgccgttaccgtgtttgttcccacctggcgc
aaagagcagcccagaccggatgcccccatcacagatcaacacatgctgatggagctcgaa
aagcgcaaaatagtggtcttcacgccgtcgcgtcgagtcgggggcaagagagtggtctgc
tacgatgaccgctttatcgtcaagttggcgcacgagtcggatggcgtgatcgtgtccaat
gacacctaccgagacctccaaggagaaagtccagagtggaagaaatgcatcgaggagagg
ctcctcatgtactccttcgtgaacgacaagttcatgccccctgatgaccctctgggtcgc
catggccccagtcttgacaacctcctcaggaaaaagcctctgcctacggagcaaaagaga
cagctctgtccatatgacaaaaagtgcacttacggcatcaagtgtaagttttaccatcca
gagcgaaccaaccagtcctacctctctctggctgatgaactgagagagaaagcccagatt
tctgcggcaaaagaagataaaaatgccagattatctcccagacagcctcagcctgatatt
ggacctgctcattcccatcctcgggacgccaacacggaggtcatgagggacggaaaaaga
tcctcgtacccaagtcacatcagtgaaaacaaactgttgcactgggaggatccgaggaac
agttcaaatcacatgcccttctctgtgacaggaggcctgtgtcagacagactggcccgcg
ccgcactctgtgcccaatcattactacgccaacatctcccacgactacctggattctggg
ctgggctcttttgagagccagtactctgataactcgcattgcctcagcagctcccacaag
ctcaggtcccagcagcgaaatgccctcgccggacccagacacaacagccactcctgtgga
tgctgttcccaggcaatgtcctcaacagttcaccgtcaacatcacggaagcctggactcc
aactgtcaacccaactatcctcacgtgttcccaccaggtgtgccacatcagcgcagtctc
cccaaccatctccactacagcggagcaccccgcaatcagcacagttactggtcagttccc
atccaggggcttccccgagcctcttcggtgcattcctcgcactcccacaactcctgccgc
tcttacgaaggccacgagtaccaatcctggggccgtcaacagccaactcccgctgcgttc
gacccccaacggatggagctccgcaagaacctgcaagccatcttcaatccggaacaggtg
gacacggtgatggaaatgttcccgcatctgatggacgccgagaaactggccgcagagatc
ctcaacctgaaggcccagcagggaatatttggatga
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