Scophthalmus maximus (turbot): 118311895
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Entry
118311895 CDS
T09850
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118311895
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118311895
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118311895
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118311895
NCBI-ProteinID:
XP_035491907
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All DBs
Position
8:complement(14493261..14498670)
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AA seq
450 aa
AA seq
DB search
MHNTVPSPEERERDSTPNMATTEMAENDVDNELLDYEEDDEPQGALESGTPANKKEVKGS
YVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAV
FVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVSVFFGGLAIKKDE
DVLKKNCPHIVVGTPGRTLALIRGKSLSVKNIKHFVLDECDKMLEQLDMRHDVQEIFRLT
PHEKQVMMFSATLSKEVRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKL
FDLLDVLEFNQVVIFVKSVHRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQR
RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAK
TLNEVQDRFEVNVAELPEEIDISSYIEQSR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcataacacagttccttcaccagaagaacgggaacgagattcgactcctaatatggca
acaacagagatggcagagaacgacgttgataacgagcttctagactatgaggaggacgat
gagccccagggagccctcgagagcgggaccccggccaacaagaaggaggtgaagggctcc
tacgtctccatccacagctccggcttccgggacttcctcctgaagccagagctgctgcgt
gccatcgtggactgtggctttgagcatccctcagaagtccaacatgagtgtattcctcaa
gcgatcctgggcatggacatcctgtgtcaggccaagtctggcatgggaaagactgcagtg
tttgttctggccaccctgcagcagattgagcctgtggatggtcaggtgtctgtccttgtg
atgtgccacacgcgggagttggccttccagatcagcaaagagtacgagcgcttctccaag
tacatgcccactgtgaaggtgtcggtgttcttcggcggcctggccatcaagaaggacgag
gacgtcctgaagaagaactgccctcacattgtcgtgggcactccagggcgtaccctggcc
ctcattcgcggcaagagcctcagtgtgaagaacatcaaacactttgtgctcgacgagtgt
gataagatgctggagcagctggacatgaggcatgacgtccaggaaatcttcaggctgaca
ccccacgagaagcaggtcatgatgttcagtgcaacactaagcaaggaggtccgccccgtt
tgccgcaagttcatgcaggatccgatggaagttttcgtggatgatgagaccaagctgaca
ctgcacggcttacagcagtattactgcaagttgaaggacagtgaaaagaaccgaaagctg
tttgacctgctcgatgtgctcgagttcaaccaggtggtgatctttgtaaagtcagtgcat
cgctgtgtggctctgtctcagctgctggtggagcagaacttccctgctatcgccatccac
aggggcatggcgcaggaggagaggttatcccggtatcagcagtttaaagacttccagcgg
cgcatcttggtcgcaaccaacctgtttggcagaggcatggacattgagcgagtcaacatc
gtcttcaactacgacatgccagaggattctgacacgtaccttcacagagtggctcgtgcc
ggcaggtttgggaccaaaggtctggctgtcacctttgtgtcagatgagacggatgcgaag
actttgaatgaggtccaggaccgctttgaggtcaatgttgcagagctaccagaggagatt
gatatttcttcctacattgaacagtccagatga
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