Scophthalmus maximus (turbot): 118311923
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Entry
118311923 CDS
T09850
Symbol
samd1b
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118311923 (samd1b)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
118311923 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF4777
Motif
Other DBs
NCBI-GeneID:
118311923
NCBI-ProteinID:
XP_035491975
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All DBs
Position
8:complement(17084428..17093203)
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AA seq
667 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLDRICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGGAETARERTKHNPLNNNGDSAHSFTDQEEGE
DSEPSPDPHTQTSASTAGKKLKPASSRSSGNGCLSCGATTGCAVGSGCEEEKASAPTDKG
LGQQGAGGCPSPGLGHRTSAHDAGEGSGTTPSKTDAVRGGKEPAPSGADSHNKTCSGSVS
SLPQQQQQKQAAPLKPKLRVGGGCTKAAGNHAKSNLGDRLVASVRSLSERSLRGSSSSAA
AAAAAAPTRGHMKPLGLKEILGYLSSQEQLSEEKLTRGKVKVVMEREVARGRLRRTRCGN
ITLPLRGAAAAAEGPMPKNASAGRLVKSALQDRHTEEKPPPSSPVQENEPMETVSGEEER
GEKEEEEEEGDPRSSDEEGGPSPVAMTTEPGLTEKPAEDTEIQAASEQESPHRQQQHGGE
ALSGMDPIPRTPSPPVQGPSLSQCDSALVEERDDLPDQLHMAAQTQIQLQYDRINHTSSG
LSNSECKTEVGESSCLLTPTASPRDSGLSEEQGINGGVGSGGCMKSEGGSGSPVDWTVSD
VVSYFTAAGFPEQAAAFSTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQRT
HFEEDGC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggatcctggaaacgatcgactccctccgctcg
aggaaagcccgtccggacctggaccggatctgtcgaatggtccggaggcgacacgggtcc
gatccggaccgaaccaggacagaactggaaaaactgattcaagagcagacggtgctcaaa
gttagctacaagggctccatatcgtaccgaaacgcggcgaaggtgcagaggaagagcaga
aagaagagtgagttcacggcggctggcggcgcggagacggcgagggagcggaccaaacac
aaccctctgaacaacaacggcgacagtgcgcacagcttcaccgaccaggaggagggagag
gactcggagcccagcccagatccccacacccaaacatcagccagcaccgctggcaagaag
ctcaagcctgcctccagccggagtagcggaaacgggtgcctcagctgtggcgcaacaacg
ggctgcgccgtcgggagcggctgcgaagaggagaaagcaagtgcgccgacagacaaggga
ttaggacagcagggagccgggggctgcccgtcgcccggtctcggccacaggacaagcgca
cacgacgccggcgaaggcagcgggacgacgccgagcaaaaccgatgcagtccgcgggggg
aaggagcccgctccgtccggagctgacagccacaacaaaacttgctccgggagcgtcagc
agcctgccccagcagcagcagcagaagcaggcggcgcccctcaagcccaaacttcgggtc
ggaggagggtgcacgaaagcagctgggaaccacgccaagtccaacctgggcgaccgactg
gtggcttccgtgcgcagcctgtccgagaggagcctccgggggagctcttcctccgccgcc
gccgccgccgccgccgccccgaccagaggccacatgaagccgctcgggctcaaggagatc
ctgggctacctgagcagccaggagcagctgtcggaggagaagctgacccggggcaaagtc
aaagtggtcatggagagggaggtggcgaggggcaggctgcgcaggacccgctgcgggaac
atcactctccccctgaggggggcggcggcggcggcggaggggccgatgccgaagaatgcg
tccgctggcagacttgtgaagagcgcactgcaggacaggcacacggaggagaagccgccg
ccctcctcccctgtccaggagaacgagccaatggaaacagtcagcggagaagaggaacgg
ggggagaaggaggaagaggaagaggagggtgatccccggagttctgatgaggagggagga
ccatcgccggtagccatgacaaccgaaccagggctcactgagaaacccgcagaagatact
gagatccaggcagcatccgagcaggagagcccccatcggcagcagcagcacggtggcgaa
gctctctcagggatggatcccatccccaggacaccgtctccacctgttcagggaccttca
ctgtcacagtgtgacagtgccctcgtggaggagagagatgacctcccagatcagctccat
atggcggcacaaacgcagattcagctgcagtatgacagaatcaaccacacctcctcgggc
ctcagcaactccgagtgtaagacagaggtcggtgagtcgtcctgcctgctcacacccact
gcctccccaagagactcgggcctgtctgaagagcaggggataaatggaggagttggtagt
ggagggtgtatgaagtctgagggcggcagtggaagcccggtggactggacagtgtcggac
gtggtcagttatttcacagcagcaggtttccccgagcaggctgctgccttcagtacccag
gaaatcgacggcaagtctcttctcctcatgcagcgcaacgacgtattgactggcctttca
atcaggctcggccccgccctcaagatctatgagcgtcatgtaaaggttctgcagagaaca
cactttgaggaggacggctgctaa
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