Scophthalmus maximus (turbot): 118311949
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Entry
118311949 CDS
T09850
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118311949 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118311949 (pds5a)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118311949 (pds5a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
118311949 (pds5a)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
118311949 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
EnP1_C
TPR_IPO5
Cnd1
PI-TkoII_IV
DUF4844
Motif
Other DBs
NCBI-GeneID:
118311949
NCBI-ProteinID:
XP_035492010
LinkDB
All DBs
Position
8:11351847..11372836
Genome browser
AA seq
1404 aa
AA seq
DB search
MEFPQQQQQRPAGDVQITYPPGVKEITDRISNDEVVKRLKMVVKTYMDMDQDSEEEKQQY
LSLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKG
LEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMH
MMDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLAKTLLKRTVQTIETCIANF
FNQVLVMGKSSVSDLSEHVFDLIQELFAIDPMLLTSVMPQLEFKLKSNDGEERLAVVRLL
AKLFGAKDSELASQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLARDLTEYLK
VRSHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLF
KKYCLHHEAGKESAQKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLDTEEKMKC
LYYLYACLDTNAVKALNEMWKCQNMLRGLVKELLDLHKLPVSEANNTSMFGKLMSIAKNL
PDAGKAQDFMKRFNQVLGEDEKLRVQLEMLISPTCSCKQAEICVREITRKLTFPKQPTNP
FLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDDEEGVTPDTAIRSGLELLKVL
SFTHPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELQQIKSTLIPVLHQ
KAKRGTPHQAKQAVHCIHAIFNNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISML
APDQFASPMKSIVANFIVKDLLMNDRSVGNKNGKLWTTDEEVSPEVLAKVQAIKLLVRWL
LGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGGAIMKLAQEPCYH
DIITPEQFQLCGLVINDECYQVRQIFAQKLHLALVKLLLPLEYLAVFALCAKDPVKERRA
HARQCLLKNISVRREFIKQNPLAQEKLVSLLPEYVVPYMIHLLAHDPDFTKPLEYEQLKD
IKECLWFMLEVLMTKNENNSHAFLRKMVENIKQTKDAQCPEDTKANEKLYIVCDVALFVI
ANKSTACHLDSPKDPVLPSKFFLVQDKEFKNDKEYLLAEMRQMLLTGKPKAAPVLGAVNK
PLTVPGRRIFTKTTPATDTASNTSNSSPLSSSTINKNSNAAVESSESRVQENNENPMIKN
DEGKKDEPSQNVTPDAVTEASPVKRRGRPPKTAATAVAAEKKETAAPTGGGAGRGRKRAA
DANSNPESVNIKVSKQQQQNDEGTKRQIDLQSRWPFVTKERDKERKREPAEDTGRAVGTV
VLLLGSEGDTEIELESSSEGREDIERYPVTQGQTSCAARSNTHSQGETKITKRGTASERQ
GEPNSEETGGPAVKRKVVKRKSRL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgcagcagcagcagcagcgaccggcgggggacgtgcagatcacctacccg
cccggagtgaaagagatcacggacagaatcagcaacgacgaggtggtcaaacggttgaag
atggtggtgaagacctacatggacatggatcaagactcggaagaggagaagcagcagtat
ctcagcctggcgctccatcttgcctcagagttcttccttaggaacccaaataaagatgta
cggctactggtggcttgttgtttggctgacatcttcaggatctatgctcctgaggctccc
tacacctcccacgacaaactcaaggacatcttcctgttcatcaccagacagttgaagggg
ctagaagacaccaagagtcctcagttcaacagatacttctacctgctggaaaacctggca
tgggtgaagtcatacaacatatgttttgagctggaggactgcaacgagatcttcatccag
cttttcaaaacactcttctctgtcatcaataacagccataaccagaaagttcagatgcac
atgatggatctgatgagttctatcatcatggagggggacggagtcacacaggagctgctg
gataccatcctcattaacctcatccctgcacacaagaatttgaacaagcaagcatacgac
cttgcaaagactctgcttaagaggactgtccagaccatagagacatgcatcgcaaacttc
tttaatcaggttttagtgatgggcaagtcatcagtgagtgacctatcagagcacgtcttt
gacctaatccaggaactgtttgccatcgacccaatgcttcttacttctgtcatgccacag
cttgaattcaaacttaagagcaatgatggcgaggagcgtctcgctgttgtacggttgcta
gcgaagttgtttggggccaaagactcagagcttgcctctcagaacagaccactgtggcag
tgcttcttaggacgcttcaacgacatccacgttccagtgaggctagagtgtgtgaagttt
gccagccactgcctcatgaaccacccagacctggccagagacctgacagagtacttaaag
gtgcgttcccatgacccagaggaagccatccgtcatgatgtcattgtcactatcatcaat
gctggaaagaaagacctcaacttggtcaatgaccagctgttgggcttcgtacgtgaaagg
actttggacaagaggtggcgtgtgcgtaaggaggccatgatgggcctggctcagcttttt
aagaaatattgtcttcaccatgaggccgggaaggagtctgcccagaagatcagctggatc
aaagacaagctgctgcacatatattatcagaacagcattgatgacaaattattagtagag
aagatctttgcccagtacatggtccctcacagtcttgacacagaggagaagatgaagtgt
ctctactacctgtatgcctgcctggacacaaatgctgtcaaggctctgaatgagatgtgg
aagtgtcagaatatgctcagaggccttgtcaaagagctgcttgaccttcacaagctgcct
gtgtctgaagctaataacacatccatgtttgggaagctgatgagtattgctaagaacctg
ccagatgcaggaaaggcccaggacttcatgaagaggttcaaccaggttcttggtgaggac
gagaagctccgagtccagctggagatgctcatcagcccgacctgctcctgcaaacaggct
gagatctgtgtgagggagatcactcggaagctgacgttccccaaacagcccaccaacccc
ttcctggagatggtcaagttcctgttggagcgcatcgctcctgtccacattgactctgag
gcaatcagtgctctggtgaagctgcttaataaatccattgaaggcacagctgacgatgat
gaggagggcgttacccctgacacagccatccgctcgggcctggagctactgaaggtccta
tcatttacccaccccacagcgttccactcagcagagacctacgagtctctgctccagtgt
ttgaagatggaggatgacaaggtggcagaggcggcgatacagattttcagaaacactggg
caaaagattgagacagagttacaacagatcaaatcgacgctgattcccgtcctgcaccag
aaggctaagcggggcacacctcatcaggccaagcaggcagtccactgtatccatgccatc
ttcaacaacaaggaagtgcagctggcacagatttttgagcctctgtcacgtagtttgaac
gcagacgtcccagaacagctcatcaccccccttgtgtcattgggccacatctccatgctg
gccccggatcagtttgcttcaccaatgaagtccatcgtggcgaacttcatcgtgaaggac
ttgctcatgaatgacagatcggtgggaaacaagaatggcaaactttggaccactgatgag
gaagtctcacctgaagttctagcaaaggtgcaagccatcaagctgctggtgcgttggtta
ttaggaatgaagaacaaccaatccaagtcggcaaactccaccctgcgcctgctgtcagcc
atgttggtcagcgagggagacctcacggagcagaagaagatcagtaaatcagacatgtct
cgcctgaggctggccgcaggtggagccattatgaagttggcccaggagccttgttaccac
gacatcatcacacctgaacaatttcagctctgcggccttgttatcaatgacgagtgctac
caggttcgtcagatctttgctcagaagttgcacctggctcttgtcaaactgctactgccc
cttgagtacttggctgtctttgccctgtgtgccaaggacccggtaaaagagcggcgtgcc
cacgcccgacagtgcctcctcaaaaacatctccgtccgcagagagttcatcaaacaaaac
ccgctcgctcaggaaaaacttgtctccctccttcccgagtatgtcgttccctatatgatc
cacctgctggcccatgacccagacttcacaaaaccacttgaatatgaacagctcaaagac
atcaaagaatgcctgtggttcatgctggaagtgctgatgaccaagaatgagaacaacagt
catgcctttcttcggaagatggtggagaacatcaaacagaccaaggatgcacagtgtcct
gaagatacaaaggccaatgagaagctgtatattgtctgtgatgttgctctctttgtcatc
gccaacaagagcactgcatgtcacctggactctcccaaagaccccgtcttaccttccaag
ttcttcctcgtacaagacaaggagttcaaaaacgataaagagtacctgttggcagagatg
agacaaatgctgctcactgggaagcccaaagctgctccggtgttgggagctgtgaacaaa
cctctgacggtaccagggagacggatctttaccaagaccacgccggccacggacacggcc
agtaataccagcaactcatctccgctgagctcctcaaccatcaacaagaacagcaacgct
gctgtcgagtcatcagagagccgagtacaggaaaacaatgagaacccgatgatcaaaaat
gacgagggaaagaaggacgagccgagtcaaaatgtgacccctgacgccgtgacggaagcg
tcgcccgtcaaacgacgtggccgcccgcctaaaacagccgccactgctgtagcggctgaa
aaaaaggaaacggcagcaccgacaggcggcggagctggtagaggcaggaagagagcagct
gatgccaactccaacccagagtcggtcaacatcaaggtgtcaaaacagcagcaacagaac
gatgaagggacaaagagacagatcgacttacagagcaggtggccattcgtgaccaaggag
agagataaagagagaaagagagagccggcagaggacacagggagagctgtagggacagtc
gtcctcctcctgggcagcgagggggacactgagatagagctggagtccagctcagagggt
agggaggacatagagagataccccgtcacacagggacaaaccagctgtgctgccaggtcc
aacacacacagccagggagagaccaagatcacaaagaggggaactgcttctgaaaggcag
ggagagcccaacagtgaagagacaggcggaccggcagtaaagagaaaagtggtgaagagg
aaatcaagactgtag
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integrated database retrieval system
