Scophthalmus maximus (turbot): 118312010
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Entry
118312010 CDS
T09850
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118312010 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_13
LRR_9
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
118312010
NCBI-ProteinID:
XP_035492132
UniProt:
A0A2U9BQP2
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Position
8:complement(16325425..16340616)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKETKALAGLVKDGGKESKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEMGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHSIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcaaaagaaaaggaccccaaaggtggtccc
gctgggaaagaaagggaaaaggagaccaaggctctggccggcttggtcaaggatggtggc
aaagaatcgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagttca
acaccgggtgttgccttctccgtcgacaatacgataaagcggccaaacccggcagcaggt
acacgcaaaaagtccagtaatgccgaggtgatcaaagaactcaacaagtgcagggaggag
aactccatgagactggacctatctaaacggtccattcacatgctgccgtcctccatcaag
gagttgacgcagctcgctgaactctacttatacagcaacaagctgcagagcttgccagct
gaggtgggttgtctatcgggcctggtcacgttggccctgagcgagaactccctgaccagt
ttgcccgactccctggactcccttaagaagcttcgaatgctcgacctgcggcacaacaag
ctgagagagataccggctgtcgtctaccggctgacatctctgaccacgctgtacctgcgc
ttcaaccgcataacaacggtcgagaaggacatccgaaatctatccaagctcaccatgctc
agcatccgcgagaacaagattaaacagctgcctgcagagatgggtgagctttgcaacctt
attactctggatgttgcccataaccagttggaacacctaccgaaggagattgggaattgc
acacagataaccaacctcgacctgcagcacaatgagctcttggaccttccagagactata
gggaatctggccagcataaatcgcttaggtctgagatataatagattatcagccattccc
agatcattagccaaatgtcgagaactggaggagctaaaccttgaaaacaacaacatttca
gtgttgccagagggcctgctttcaagtttggtcaacctgacaagtctaacactggcaagg
aattgcttccagtcgtaccctgtgggcggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgaatcaacaagatcccctttggtatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccgctggactttggcaca
tggacgagcatggtcgagcttaacctggccactaatcagctgacaaagatcccagaggac
gtctgtggtctagtctctctagaggtgttaatattgtccaataatcttctcaagaagtta
ccacatagtattgggaatttgaggaagctacgagagctcgacttagaggaaaacaagttg
gaatgtctgcctaatgaaattgcatatcttaaagatttacagaaattggtgttgacaaat
aatcagctgactacgttacccagaggcatcggccacctcaccaacctgactcatctgggt
ttgggagagaacctgctgcaacaccttcccgaggagattggtacactggagaacctggag
gaactgtacctcaatgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccccagatt
gtggcggggggcccctccttcatcatccagttcctcaagatgcagggaccgtaccgtgcc
atggtctga
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