Scophthalmus maximus (turbot): 118312069
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Entry
118312069 CDS
T09850
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118312069 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118312069 (trim25)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118312069 (trim25)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118312069 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_5
RING_XB3-XBAT31
U-box
ANCHR-like_BBOX
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
118312069
NCBI-ProteinID:
XP_035492251
LinkDB
All DBs
Position
8:21185964..21194139
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AA seq
654 aa
AA seq
DB search
MATTDDTPFSLKGLEDELTCSICLSPFDCPVTIPCGHNFCRSCLLATWKEAYSCPQCRTH
FSTKPELKKNTVLSTVVETFNLRSNKSDVCLLGEEQEAEGKDVIRCDTCMEAEASQTCLT
CMASFCEEHLRPHRENPIFRPHQLSEPVGDLSERICPDHHKLMELFCKQHVRPICSLCLQ
QVHKGCPFTSPEEQRTLKEQDLIDKLDLLDGKISHNRTVIHQMMDMQDVLMDSAANRKQA
LAAEYQQMRDMLTHEESVALNAVSQELESGKTKLRGLTKKFTENIDHMSKAQEDIRSLLG
QSTSLAFLQASFNLPSAVNFDPYTPRIYLDSKRVMANEAFAAGLKEHLTELFNQPVEARL
QMMKPGEWGASASGFRPINAFQDYEPPGHPRPPNFQGGDPSSQPRAGPKKKPPKETKKTQ
STKGTMGNVNLTHSMENLLLGGKNKAKGCPAPQPNQRPEISNIPSNITSAEKRSDLLKYG
TALTLDPKTSHRRIILSEEFTKASVTDEQENYPNCPQRFAVCSQVLTSQSFSRGRHYWEV
RLSCNNFIGIGLAYRSIDRKGPNSRLGRNAQSWCVEWFNVKLSAWHNSSETVLANPNPKR
VGVLLDLEGGVVTFFNVSDRAYPFHCFAFPFTEAVFPAFWMFSSGSSISLCKMQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacggacgacactccgttctctctgaagggtctggaggatgagctgacctgc
agcatttgtctgagccccttcgactgtccggtgaccatcccctgcggacacaacttctgc
cggagctgcctgctcgccacctggaaggaagcctacagctgtccccagtgtcggacccac
ttcagcaccaaaccggagctgaagaaaaacacggtcctcagcaccgtggtggagaccttc
aacctgaggtcgaacaagagcgacgtctgtctgttaggagaggagcaggaagccgaggga
aaggatgtcatacggtgtgatacctgcatggaggcagaggcgtcccagacctgcctcacc
tgcatggcctcgttctgtgaggagcacctgcgtcctcaccgggaaaacccaatcttccgt
ccccaccagctgagtgagcctgtcggggacctgtcggagcgcatctgcccggaccaccac
aagctgatggagctcttctgcaaacaacatgtccgcccgatctgcagcctctgcctccaa
caagtccacaaaggctgtcccttcacttctcctgaggagcagaggacgctgaaagagcaa
gacctgatagataagttggatttgctggatgggaagatttcacataacaggactgttata
catcaaatgatggacatgcaggatgtgttgatggactcagccgccaacaggaagcaagct
ttggcagccgaatatcagcagatgcgtgacatgttgacccacgaggagagcgtcgctctg
aacgcagtgagtcaagagttggagagtggtaagaccaaactccgtggtctcacaaagaag
ttcacggagaacatcgatcacatgagcaaagctcaagaggatatccgcagtctgcttggt
cagtccacatcactggccttcctacaggcgtcattcaacctgccctcagctgtaaacttt
gacccttacacccctcgaatctacctggactccaagagggtgatggcgaacgaggccttt
gctgctggcttgaaggagcatctgactgagctttttaatcagcctgttgaagccagactg
caaatgatgaaaccaggtgaatggggagcttctgcctcaggatttagacccatcaacgct
ttccaagactatgagcctcctggtcatcccagacctcccaacttccaaggtggagatccg
agctcacaacccagagcaggcccaaagaagaagcctccaaaagaaaccaaaaaaacacaa
tccactaaaggcacgatgggaaatgtgaacttaacccattcgatggaaaatctgttgctt
ggtgggaaaaacaaagccaaagggtgtcccgcccctcaacccaatcagagaccagaaatt
tcaaacattccctcaaacataacatctgctgaaaaaagaagcgacctcttgaaatatggc
acagcactcactttggatccaaagacctcccacagacgcatcattctgagtgaggagttt
actaaggcgtctgtgacagatgagcaggaaaactaccccaactgccctcaacgatttgct
gtctgctcccaggtgctcacctctcagagtttctctagagggcgccactactgggaagtc
cgactcagctgcaacaacttcattggcataggcttggcttaccgcagtattgaccgcaaa
ggtcccaacagtcgactgggccgcaatgcccagtcctggtgtgttgagtggtttaacgtc
aagctgtcagcttggcataacagcagcgagaccgtgctggccaatcccaatccaaagcgc
gttggtgtgctgttggatcttgagggcggcgtggttacattctttaacgtgtcagacagg
gcgtatcccttccactgctttgcgtttccctttactgaagcagtgtttccagctttctgg
atgttctcaagtggttcatccatttctttgtgcaagatgcagtaa
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integrated database retrieval system