KEGG   Scophthalmus maximus (turbot): 118312069
Entry
118312069         CDS       T09850                                 
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:smau00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    118312069 (trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118312069 (trim25)
Enzymes [BR:smau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118312069 (trim25)
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118312069 (trim25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-B_box zf-RING_5 RING_XB3-XBAT31 U-box ANCHR-like_BBOX zf-RRPl_C4
Other DBs
NCBI-GeneID: 118312069
NCBI-ProteinID: XP_035492251
LinkDB
Position
8:21185964..21194139
AA seq 654 aa
MATTDDTPFSLKGLEDELTCSICLSPFDCPVTIPCGHNFCRSCLLATWKEAYSCPQCRTH
FSTKPELKKNTVLSTVVETFNLRSNKSDVCLLGEEQEAEGKDVIRCDTCMEAEASQTCLT
CMASFCEEHLRPHRENPIFRPHQLSEPVGDLSERICPDHHKLMELFCKQHVRPICSLCLQ
QVHKGCPFTSPEEQRTLKEQDLIDKLDLLDGKISHNRTVIHQMMDMQDVLMDSAANRKQA
LAAEYQQMRDMLTHEESVALNAVSQELESGKTKLRGLTKKFTENIDHMSKAQEDIRSLLG
QSTSLAFLQASFNLPSAVNFDPYTPRIYLDSKRVMANEAFAAGLKEHLTELFNQPVEARL
QMMKPGEWGASASGFRPINAFQDYEPPGHPRPPNFQGGDPSSQPRAGPKKKPPKETKKTQ
STKGTMGNVNLTHSMENLLLGGKNKAKGCPAPQPNQRPEISNIPSNITSAEKRSDLLKYG
TALTLDPKTSHRRIILSEEFTKASVTDEQENYPNCPQRFAVCSQVLTSQSFSRGRHYWEV
RLSCNNFIGIGLAYRSIDRKGPNSRLGRNAQSWCVEWFNVKLSAWHNSSETVLANPNPKR
VGVLLDLEGGVVTFFNVSDRAYPFHCFAFPFTEAVFPAFWMFSSGSSISLCKMQ
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcgacgacggacgacactccgttctctctgaagggtctggaggatgagctgacctgc
agcatttgtctgagccccttcgactgtccggtgaccatcccctgcggacacaacttctgc
cggagctgcctgctcgccacctggaaggaagcctacagctgtccccagtgtcggacccac
ttcagcaccaaaccggagctgaagaaaaacacggtcctcagcaccgtggtggagaccttc
aacctgaggtcgaacaagagcgacgtctgtctgttaggagaggagcaggaagccgaggga
aaggatgtcatacggtgtgatacctgcatggaggcagaggcgtcccagacctgcctcacc
tgcatggcctcgttctgtgaggagcacctgcgtcctcaccgggaaaacccaatcttccgt
ccccaccagctgagtgagcctgtcggggacctgtcggagcgcatctgcccggaccaccac
aagctgatggagctcttctgcaaacaacatgtccgcccgatctgcagcctctgcctccaa
caagtccacaaaggctgtcccttcacttctcctgaggagcagaggacgctgaaagagcaa
gacctgatagataagttggatttgctggatgggaagatttcacataacaggactgttata
catcaaatgatggacatgcaggatgtgttgatggactcagccgccaacaggaagcaagct
ttggcagccgaatatcagcagatgcgtgacatgttgacccacgaggagagcgtcgctctg
aacgcagtgagtcaagagttggagagtggtaagaccaaactccgtggtctcacaaagaag
ttcacggagaacatcgatcacatgagcaaagctcaagaggatatccgcagtctgcttggt
cagtccacatcactggccttcctacaggcgtcattcaacctgccctcagctgtaaacttt
gacccttacacccctcgaatctacctggactccaagagggtgatggcgaacgaggccttt
gctgctggcttgaaggagcatctgactgagctttttaatcagcctgttgaagccagactg
caaatgatgaaaccaggtgaatggggagcttctgcctcaggatttagacccatcaacgct
ttccaagactatgagcctcctggtcatcccagacctcccaacttccaaggtggagatccg
agctcacaacccagagcaggcccaaagaagaagcctccaaaagaaaccaaaaaaacacaa
tccactaaaggcacgatgggaaatgtgaacttaacccattcgatggaaaatctgttgctt
ggtgggaaaaacaaagccaaagggtgtcccgcccctcaacccaatcagagaccagaaatt
tcaaacattccctcaaacataacatctgctgaaaaaagaagcgacctcttgaaatatggc
acagcactcactttggatccaaagacctcccacagacgcatcattctgagtgaggagttt
actaaggcgtctgtgacagatgagcaggaaaactaccccaactgccctcaacgatttgct
gtctgctcccaggtgctcacctctcagagtttctctagagggcgccactactgggaagtc
cgactcagctgcaacaacttcattggcataggcttggcttaccgcagtattgaccgcaaa
ggtcccaacagtcgactgggccgcaatgcccagtcctggtgtgttgagtggtttaacgtc
aagctgtcagcttggcataacagcagcgagaccgtgctggccaatcccaatccaaagcgc
gttggtgtgctgttggatcttgagggcggcgtggttacattctttaacgtgtcagacagg
gcgtatcccttccactgctttgcgtttccctttactgaagcagtgtttccagctttctgg
atgttctcaagtggttcatccatttctttgtgcaagatgcagtaa

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