Scophthalmus maximus (turbot): 118312091
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Entry
118312091 CDS
T09850
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2 isoform X1
KO
K13339
peroxin-6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118312091 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118312091 (pex6)
Membrane trafficking [BR:
smau04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
118312091 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
TIP49
RuvB_N
AAA_22
AAA_5
AAA_33
PEX6_4th
NPHP3_N
Vps4_C
RNA_helicase
Mg_chelatase
TsaE
DUF815
Cytidylate_kin
AAA_7
nSTAND3
AAA_25
AAA_17
AAA_28
Parvo_NS1
AAA_24
AAA_14
IstB_IS21
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
118312091
NCBI-ProteinID:
XP_035492280
LinkDB
All DBs
Position
8:complement(850656..860586)
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AA seq
1063 aa
AA seq
DB search
MAVQVELCCVDSFPAHLSPLDALMLQSHLDVVFQRDTDPPTVLFTPQRPQGRGRADVLLR
VHPTADEETAGCGERLVDSESRSRVRLLVSRVFLRHHGLPRLGGAGTVRPLEPVPLDTVV
LGARSRQSLRWAGAGQFTGALLELCGPGQWLLARQGDPLLLPPRHPPLEEEPGQQQLWDL
SVLSCSPVTQGRITADTSLVLIDCWDPVAPPAPPPPPGRPLSLSVSDFAHYADGLAGGRS
LLDSRKLLGSGFSGILRALECRVDVRVVDARRWVGVGGRQGAAAVDVDGCVFVSKQLLLR
LGLFNHEWVKMSRVGAASRPQTGQSGQSDVRGGVGRERLVSVVVVDLTPSPELQNHEEVG
FISATLWFNLTEGEVVPVNCCTLRMKRWSPSPPQSAGRSDSSCRSASPPLAGELHIQPVA
SPLYDGLGHFDALLSEHFSTPRLVSQGDILSVPTENHPDLLQNNSEGIHRSPVLFFRVQK
VCPSAEREEEEEEDGGAGAHLADRLHTSLYMGASTNSPVPCCSLDGASPPGLDKTVDLLS
SIILPHLQHSSSLSGCTVLLHGPAGSGKVTVTGAASRRLNLHLLKVDCVSVCADTAAAVE
VKLASVFQRAGALRPCVLLLRNLHLLLRPRGGAGEEDGRVRAALCQLLGSAPTSVAVVAT
VCRPRDLSAGVMTAFVHQLAMESPTEEQRRSMLAGLSRDLRLGRDVSLERLAKLTAGFVL
GDLRALLAEAGRAACRRLVHSSGGRPEEDLCSSGVTVLNRDFASALETLQDAQSKAVGAP
KIPDVRWEDVGGLQQVKREILDTVQLPLQRPELLSLGLSRTGLLLYGPPGTGKTLLAKAV
ATECSMTFLSVKGPELINMYVGQSEENIREVFHRARSAAPCVVFFDELDSLAPSRGRSGD
SGGVMDRVVSQLLAELDALHSTVGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRV
SQLQVLQAVLRKFRLDPAVNLEVVLDSCPAHMTGADLYALCSDAMTAAIKRKISLIDDGV
DSQDSPVVVSADDFSAALENFKPSVSEQELLRYRNIQQTLSVK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtggagctgtgctgtgtggacagtttccccgctcacctgagtcctctg
gacgcgctgatgctccagtctcacctggatgtcgtcttccagcgcgacacggacccgccc
accgtcctcttcaccccgcagcggccgcagggacgcgggcgggccgacgtgttgctgcgc
gtccacccgaccgccgacgaggagaccgcgggctgcggagagagactcgtcgacagcgag
tcgcggagccgcgtgcggctgctcgtcagccgcgtcttcctgcggcaccacgggctcccg
cggctcggaggcgccggcaccgtccggcctctggagccggtccccctggacacggtggtg
ctgggagcccgcagcaggcagagcctccgctgggccggagcggggcagttcaccggcgcg
ctgctggagctctgcggcccgggacagtggctgctggcccggcagggagacccgctgttg
ctgcccccccgacacccgccgctggaagaggagccgggacagcagcagctctgggacctg
tcggtgttgtcctgcagtccggtgacgcaggggcggatcacagccgacacctctctggtc
ctgattgactgctgggacccggtggcccccccggccccccctcctccgcccggcaggccg
ctcagtctgagcgtgtctgacttcgctcactacgccgacggcctcgcaggggggcggtct
cttctcgacagcaggaagctgctgggctcggggttctccggcatcctgcgcgcgctggag
tgcagggtggacgtgcgggtggtggacgcccggcgatgggtcggcgtgggaggccggcag
ggggcggcggcggtggacgtggacggctgcgtgtttgtgagcaaacagctgctgctcaga
ctggggctgttcaaccacgagtgggtgaagatgtcccgggtgggcgcagcctccagacct
cagacgggtcagtcgggtcagtcggacgtcaggggcggcgtcggcagggagcggctggtc
tctgtggtggtggtggatttgacaccgagtccagagctacagaaccacgaggaagtcggt
ttcatatcggcgactctgtggttcaacttgactgaaggggaagtggttcctgtgaactgc
tgcacactgaggatgaagaggtggagtccgtctccgccgcagtccgccggacgctctgac
agctcctgtcgctcggcttctcctccgctggccggcgagcttcacatccagccggtggcg
tctccgctgtacgacggcctcggccacttcgacgcgctgctctcggaacacttcagcact
cccagactggtgtcgcagggagacattttatcagttcccactgaaaatcatccagatctg
ctacagaacaactccgagggcatccacaggagtccagtgctgttcttcagagtgcagaag
gtttgtccgtctgcagagagagaagaagaagaggaagaggacggtggagccggagctcac
ctggccgacagacttcacacctcgctctacatgggagcgtccaccaacagccccgtcccg
tgctgctcgctggacggagcgtctcctccgggcctcgacaagaccgtggacctgctcagc
agcatcatcctgccccacctgcagcacagcagctccctgtcgggttgcaccgtcctcctt
catggtcctgcaggaagtggtaaggtgacggtgaccggtgcggcgagtcgcagactgaac
ctccacctgctgaaggtggactgtgtgagcgtgtgcgccgacaccgctgcagctgtggag
gtgaagctggcgtcggtgtttcagagggccggcgccctgcggccctgcgtcctgctgctc
aggaacctgcacctgctgctccgacccagagggggcgcgggcgaggaggacggccgggtc
cgggcggcgctctgccagctgctcggcagcgcccccaccagtgtggcggtggtggcgacg
gtctgcagacctcgggacctgtctgcaggtgtcatgacggcgttcgtccaccagttggcg
atggagagtcccacggaagagcagcggcgctccatgctggccggcctgagccgagacctt
cgcctgggcagagacgtcagcctggagaggctcgccaaactcacggcgggtttcgtgttg
ggggatctgagagctctgctggcggaggcgggtcgcgctgcctgtaggaggctggtccac
agcagcggtggtcgtccagaggaggacctgtgctccagcggagtgaccgtcctgaaccgg
gacttcgcctcggccctggagacgctgcaggacgcccagtccaaggccgtcggcgcgccg
aagatccccgacgtgcggtgggaggacgtcggcggcctgcagcaggtgaagagagagatc
ctggacacggtgcagcttcctctgcagcggccggagctcctgtctctgggtctaagccgg
accggactgctgctgtacggaccgccggggacggggaagaccctgctggccaaggccgtg
gccaccgagtgctccatgaccttcctcagtgttaaaggtccagagctcatcaacatgtac
gtgggtcagagtgaagagaacatcagagaagtgttccacagagcgcgttcagcagcgccc
tgcgtcgtgttcttcgacgagctggactctctggctcccagcagggggcgcagtggagac
tctggaggggtgatggacagggtcgtgtctcagctgttggccgagctcgacgctctgcac
tcgactgtcggggtttttgtgatcggagcaacaaaccgtccagacctgttggaccaatcg
ctgctgagacccggcaggttcgataagctggtctacgtgggaatcaacgaggatcgagtg
tctcagctacaagtcctccaagccgtcctcagaaagttccggttggaccccgctgtgaac
ctggaggtggtgctggacagttgccccgcccacatgaccggcgccgacctgtacgcgctc
tgttcagacgcaatgacggccgccatcaagaggaagatctctctcatcgacgacggtgtg
gactcacaggactctcccgtcgtcgtctctgctgacgatttctctgctgcgttagaaaac
ttcaagccgtcagtttcagaacaggagctgctgcgatacagaaacatccaacagacactc
agtgtgaagtag
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