Scophthalmus maximus (turbot): 118312145
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Entry
118312145 CDS
T09850
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118312145 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118312145 (usp43a)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118312145 (usp43a)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118312145 (usp43a)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118312145 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
118312145
NCBI-ProteinID:
XP_035492405
LinkDB
All DBs
Position
8:complement(13983125..14068964)
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AA seq
1231 aa
AA seq
DB search
METRRENKVRRQPMKPRSATRKDKKSTTGRFVRRKSLRSFGNFMGRILKTLGTLAHFGNA
EPPDAEDDDGGFGRSAAAAAAAPCRDATAKKSSTTSSSHGSVKERLSWCYGDKTPGVLGL
KNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYRADACRGGARGARGAGEEPPADRGEVTVQ
LASLVRALWTLEYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDASSSTN
NNNGSSSSSSSNKTKADAKGPGPLEESPSPSSASSHQPRGRHSFVQEHFQAQYRSSLTCP
HCLKQSNTFDPFSCISLPIPLRQTRAMCVTLVFSTKGQRYLRVGLALPLFGTLSCLRAMV
AEEGNITPDQVILSELYSTGFQRSFSDEDDLTTIADSDVVYAFQAPPLFSRGGSAPHSGY
HHSLPSSPYSSAAGPDGQRLPPSGTLSSEYLNQGGSGKLLLLICNTAGSGQQAVRFGPPF
LMREDRSISWEQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSAAYSYLSPQDSRPL
YHPAVDRALKFCGTGGPPHVKLVIEWDHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQH
SCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGER
RNKLSTLVRFPLTGLDMAPHMVKRSQSMRNLNLGAWPPAWKPPSGQHHQAADLTLPQEYQ
YDLYAVCNHHGGMHGGHYTAYCRNSVDALWYSYDDSSVDLVPEEEVCTRGAYILFYQRRN
AIPQWSASSSIRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTTCPSSVPDSPESPVFLDD
VSKEERGGFEPRPFVRGLQGRSMSMRAPSKTKDTLSKMLPLRWSFGSKDKRKSDPVPPPA
QDSAPVELVQYLESGRRPRCTKDPIVTLMSEPRGTKEAAEGHAAANVQSSGIGSLRCVGK
ARHELPPESPQVPEGQRRASDKTASLRRSKGSQARDESTSNISSSSSSNTLTRRKDARKQ
SSSKASQDTETKRSAGVQPSFSTPSLHDGTLRRQRGERDEHQGAYEANSRNKREVPKSHE
GLFSFLKGNFLKKDKDPRKSNVGESERGGGEEGGRRSLSRLSLSNGAAGGRTGVEGGKTN
GSGHLGDEPANGKVGRRTADIKRSQSSSNIPTKAEPSMHRTASLHRNGTSTAAAAPPRSL
TADKPSYGTLQRTRYSTTSLGRKRTVPESSF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcagggagaacaaggtgaggagacaacccatgaaaccgcggtcggcgacg
cgcaaagacaagaagtccacgacgggcaggttcgtccgcaggaaatcgctgcgctccttc
gggaatttcatgggaaggatcctgaaaactttgggcactttggcgcacttcggcaacgcg
gagccgccggacgcggaggacgacgacggcggcttcgggcgcagcgcggcggcggcggcg
gcggcgccctgccgggacgcgacggcgaagaagagctccacgacgtcctcgtcccacggc
tcggtgaaggagcggctgtcgtggtgctacggcgacaagacgcccggcgtgctggggctg
aagaaccacggcaacacctgcttcatgaacgccgtggtgcagtgcctgagcaacacggac
ctgctggccgagtacctcggcctggagcagtacagggcggacgcgtgccgcgggggggcg
aggggggccaggggagcaggagaggagcccccggccgaccgcggagaggtcaccgtgcag
ctggcgtcgctggtccgagcgctgtggacgctggagtacacgccgcagctgtccgtggag
ttcaagagcatagtggccaaatacggctctcagtttcgtgggaactcccagcacgacgcc
cttgagttcctcctctggcttctggacagagttcatgaagatgccagttccagcaccaac
aacaacaacggcagcagcagcagcagcagcagcaacaagaccaaagctgatgccaaggga
ccaggtccgctggaggagtctcccagccccagttccgccagctcgcatcagcctcgaggt
cgacacagttttgtgcaggaacacttccaggctcagtacaggtcttctctgacgtgccct
cattgccttaagcagagcaacacctttgacccgttttcatgtatctccctgccgatcccg
ctgcgacaaaccagagcgatgtgtgtgacgctggtgttcagtacaaagggtcaaaggtat
ctgcgagtcgggctggctctgcctctctttggtaccctgtcctgcctgagagccatggtg
gcagaggagggcaacatcaccccagaccaggtcatcctgtcagagttgtactccacgggt
ttccagcgctccttctcagatgaggatgacctgacgacaatcgctgacagcgacgtggtc
tacgccttccaggctcctcccctctttagtcgtggaggctcagcaccacactcagggtat
caccacagcctcccctcctccccctactcctccgcggcgggacccgacggccagaggctg
cctccgtccggcaccctctcctctgagtacctgaaccagggcggctccgggaagctcctc
ctcctcatctgtaacaccgcagggtccggccagcaggctgtcaggttcggacctccattc
ctcatgcgtgaggacaggagcatctcctgggagcagctgcagcagagcatcctcagcaag
ctctattatctgatgctgaatggatcccaggctcagaacgctggggtgctcttcaagatc
cgagtggtggggggatctgcagcctacagctacctgtccccacaggacagcaggccactc
taccaccctgctgttgatagagcgctgaagttctgcggcaccgggggacctcctcacgtg
aagcttgtcatcgagtgggatcacaagactaaagaatgtctgtttggcagcatccaggag
gaggtggtgaaggatgcagagagtgtgaggaaccagcagcagcaacacctgcagcagcat
agctgcaccttggacgagtgcttccagctgtataccaaagaagaacaacttgcccccgac
gatgcctggaagtgtccccactgtaaacagctgcagcagggcatggtgaagatgagcctg
tggactctccccgacatactgatcctccacctcaagcgcttcagacaggtcggcgagcgg
aggaataagctgtcaaccttggtgcgtttccccctgactggattggacatggccccccac
atggtgaagcggagtcagagcatgaggaacctgaacctgggggcatggccacccgcctgg
aagccgccctcggggcaacaccaccaagctgccgacttgaccctcccacaggagtatcag
tacgacctctacgctgtgtgtaaccatcacggaggaatgcacggaggacattacacagct
tactgtagaaattcagtggacgctctgtggtacagctacgatgacagcagcgtcgacctg
gtgccagaggaggaggtgtgtaccagaggagcctacatcctcttttaccagagacgcaac
gccatccctcaatggtcggccagcagctccatcagaggctccacaagttcttcaatgtcg
gaccactggctaatccggctgaccggggacagtaagagaggcagtctggtgtctcggtca
tccaccacctgcccatcatccgtgcctgactctccagagtctccggtcttcctcgacgat
gtttctaaagaggaaagggggggttttgagcccaggccatttgtcaggggtcttcagggg
cgcagcatgagcatgagagcccccagcaagaccaaggacaccctgagcaaaatgcttccc
ctgcgctggtcctttggttccaaggacaaacggaaatctgacccagttcctccaccggcc
caggattctgccccagtggagctggtgcagtacttggaatctggccgccggccacggtgc
acaaaggacccgatagtaactctgatgagcgaacctcgaggcacaaaggaagctgctgaa
ggccatgctgcagccaatgtccaatcttccgggatcgggagtttgcgatgtgtgggtaaa
gcaagacatgagctgcctccggagtctccacaggtcccagagggccagaggagggcgtca
gacaagaccgccagcctgagacgcagcaaggggagccaggcgagggatgagagcacttca
aatatcagcagcagctccagcagtaacaccctcaccaggaggaaggatgccagaaagcag
agctcctccaaagcttcccaggatactgagacgaaaagaagtgctggagttcagcccagc
ttcagtacacccagccttcatgacgggactctgagaagacaaagaggagaaagggatgaa
catcaaggtgcatatgaagcaaactctaggaacaagagggaagtgcccaagagtcacgag
ggactgttctccttcctaaaaggtaacttcctgaagaaggataaggacccgaggaagtcc
aatgtgggtgagtcagagagaggggggggtgaggaaggaggcaggaggagcttgtcaagg
ctgtcgctgtccaacggagcagcaggaggccgaactggggtggaaggaggaaagactaac
ggctcaggccacctgggcgatgagccggcgaacggcaaagtgggacgcaggacggccgac
atcaagcgctcccaaagttcctccaacatccccaccaaggccgagccgagcatgcacagg
acagcatccctgcatcgcaacggcacgtccacagccgccgcggcgccgccacgcagcctg
acagcagacaaaccgtcgtacggcacgctgcagaggactcgctacagcacaacctcgctg
gggcgcaaaaggacagtgcccgagtcgagcttctga
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