Scophthalmus maximus (turbot): 118312197
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Entry
118312197 CDS
T09850
Symbol
atg4da
Name
(RefSeq) cysteine protease atg4da
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04136
Autophagy - other
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118312197 (atg4da)
04136 Autophagy - other
118312197 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118312197 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118312197 (atg4da)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118312197 (atg4da)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118312197 (atg4da)
Membrane trafficking [BR:
smau04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118312197 (atg4da)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118312197 (atg4da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
118312197
NCBI-ProteinID:
XP_035492496
LinkDB
All DBs
Position
8:13078313..13086450
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AA seq
498 aa
AA seq
DB search
MNSVSPSTVQYIGGAMQDELVESRRQQQQPMERQGNFSLRPPQSPDPSREAAGEPDEMDK
LKAKLMSAWNNVKYGWTVKSKTSFNKMSPVIVLGQSYVLNSEDEVERFRLAFVSRIWLTY
RREFPQLEGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWAWPDAQQLTDVDLEVFRP
RSPARAGGVPIPSFGSPRGSNTPEKSLPSEQGPKTSQKKRPECARDRLAEPIHRKLVTWF
GDQPRASFGVHQLVEIGKSSGKKAGDWYGPSIVAHILRKAVSKTSALHNLAVYVAQDCTV
YKEDVARLCDPSRSQAPPDPSSQAWKSVIILVPVRLGGEALNPSYIECVKNILKLECCIG
IIGGKPKHSLYFIGFQDEQLLYLDPHYCQPVVDVTQVNFSLESFHCSSPKKMPFTRMDPS
CTIGFYAKNKKDFESLCSAVHVALSSSEEKYPIFTFVEGQGQDYGLEGHSSGPAAHILPP
GNLGRSNNRRNSDEFVFL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtttcccccagcacagttcagtacattgggggagcgatgcaggatgagctg
gtggagagccggaggcagcagcagcagccaatggagcggcagggcaatttcagtctcagg
ccgcctcagagcccagatcccagcagagaggcagccggagagcctgatgagatggacaaa
ctgaaagccaaactgatgtcagcgtggaacaacgtcaaatatggttggactgttaagtct
aaaacctccttcaacaagatgtcaccagtcattgtcctgggacaatcctatgtgcttaac
agtgaggacgaggttgagcggtttcgtttggcctttgtgtcccggatctggctcacgtac
aggcgagagttccctcagctggagggctccacctggaccacagactgtggctggggctgc
atgctgcgcagcggccagatgctgctggcacagggactcctggtccatctgatgccaaga
gattgggcttggccagatgcgcagcagctaaccgatgtggacttggaagttttcagacca
cgttccccagcccgggctggtggggtccccatcccttcttttgggtctccacgagggtcc
aacacccctgaaaagtccttgccaagtgagcagggccccaaaaccagccagaagaagaga
ccagagtgtgcaagggacagactagcagagcccatccaccgtaagttggtcacctggttc
ggggatcagccccgggcgtcgttcggagttcaccaactggtggaaattggcaaaagttca
gggaagaaggccggtgactggtacggcccctctatagtggcacacatactacggaaagca
gtctccaagacctctgctctccacaacctggctgtatacgtggctcaggactgtacagtg
tacaaagaggatgtggctcgtctgtgtgatccgtcacggagccaggcgcctcctgatccg
tccagccaagcctggaagtctgtcatcatactggtgcctgtgcgactgggaggggaggcc
ctcaacccatcgtacatcgaatgtgtcaagaacatcctaaagctggagtgttgtattgga
attattggagggaaaccgaagcattcgctctacttcattggcttccaagatgagcagctg
ctgtatctggaccctcactactgccaacctgtggtggacgtgacacaagtcaacttctcc
ctggagtccttccactgtagctctcccaaaaagatgcccttcacccgcatggatccgagc
tgtaccattggcttttatgccaagaacaagaaggactttgagtcgctgtgttctgctgtt
catgtggccctgtcgtcatccgaggagaagtaccccatctttaccttcgtagagggccag
ggtcaggactatggacttgagggtcatagcagtggacctgcggcccacatcctgcccccg
ggcaacctaggcaggagtaacaacagaagaaacagcgatgagtttgtcttcctctaa
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