Scophthalmus maximus (turbot): 118312226
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Entry
118312226 CDS
T09850
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau02010
ABC transporters
smau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118312226
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118312226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118312226
Transporters [BR:
smau02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118312226
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
118312226
NCBI-ProteinID:
XP_035492536
LinkDB
All DBs
Position
8:15935146..15972872
Genome browser
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFLDAKKILLYTQNDK
SQEGYKGLLRALRKLQKNTASFKLKDFLKDNETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTMPLEEFVHIADSNVSRMTQEIICHSSSDWLNKAQSHFLSNLDF
LKPIRKDVRSDPKVVQEVSAATDLLLESLGALAVELAGMESWKDMRKEILYLTVNATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDTDPLSAYDNSSTPYC
NSMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEELKPKVWNFMENGEEMDMVRTLLQNNASAAFFNAQLSETEWRVSDVFDFLSKASEDQR
PAGSAHTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDITRSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGTKERTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KLVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAFLY
GVMTWYIEAVFPGQFGIPRPWYFPFTKTYWCGEKENKNFSTLMSKKDNAEAVCIEEEPGH
IDPGVYIENLVKVYSHGNKLAVDGLSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQ
IVNDVGLPHKRKSRSCTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLALQSCRNSASTVSYSKKTEKEDSVSESSSDAGLGSEPESETTTVDVSLISNVIFKHVP
EARMVEDLGHEITYILPYKSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYKVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDPGMYGEQFTFISNDLPEDPHINKLLGALTEKPGFGTRCMEGEPIRDTRCTE
VEDEWSAPQVSESVKEMFDQGNWTMENPSPVCECSCEGRKKMLPECPAGAGGLPPPQMKI
SDKDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARGSQLLSNRDEI
DDAIAHLRRRFRLERGTAADRFFHSLSTFVQGLDTKNNVKIWFNNKGWHSIGSFLSVMNN
GILRASLPAGKDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAVEGAVFFCITVLIQYRFCIKNRSSASHLKPIGEEDEDVARERQRILGGGGQSDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTSGEAY
LAGKSVTAEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNTILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPAMEFIEQELPGSTLKEKHRNMLQYQLPSSRTSLARIFSLLAKNKETLSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDLHLSKRDAVVVDFSQLNSLLTDNKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttactgctttggaaaaacttcacctaccgacggaga
cagacaatccagctgctgattgagatcgtctggcccctgttcatcttcttcatcctgatc
tcagtccgaatgcattatccgccctacgagcaacatgaatgccatttccctaacaaggct
atgccctcagcgggtaccctgccctgggtacaaggcatcatctgtaacgccaacaacccc
tgcttccgcaatcctacccccggagagagtcctgcagttgtgggaaacttcaacgactcc
ataatctcccgtctgttcctcgatgccaaaaagatcctgctgtacactcagaatgataag
agccaagagggctacaagggactgctgagggccctcaggaagctgcagaagaacactgcc
agtttcaagttgaaggactttttgaaagacaacgagaccctttcccacttcctgcaccac
aacgcctcacttcctcgtcacgctttgaagcagatagtggaggctgacgtcaatctggag
aaggtgctgactaaaggttttggcttccatctcagagacctctgtaacaccatgccgctg
gaggagtttgttcacatcgctgacagcaacgtgtcccgaatgactcaagaaatcatctgc
cactcctccagtgactggctcaacaaggcacagagccacttcctgtccaatctggacttc
ctcaaacccattcggaaggatgtgaggtcggaccccaaagttgttcaggaagtctcagct
gcaaccgaccttcttctggagagcctgggagcactggctgtggagcttgccggtatggag
agttggaaggacatgcgaaaggagatcctgtatctaactgtgaatgccacaggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtctgcggacaccccgagggaggtggcctc
aaaatcaagtccctcaactggtatgaggacaacaactacaaggccctgtttggaaaccat
ggcaacgacagcgacactgaccctctctctgcttatgacaactcttccactccatactgt
aacagcatgatgcggagcctggagtccagccccatctccaggatgatctggagagctctg
aagccactgctcatggggaagatcctgtacaccccagatactccagcaacacagaggatc
atccacgaggttaacaagaccttccaggagctcggtgtgctgagggatcttggtgggatg
tgggaggagttgaaacccaaagtttggaacttcatggagaacggcgaagaaatggacatg
gtccggaccctgctgcagaataacgccagcgctgcgttctttaacgcccagctcagtgag
accgagtggcgcgtgtcagacgtgttcgacttcctgtccaaggcctcggaggaccaaaga
cccgcaggatccgcccatacgtggagagatgtcttcaacgaaactgaccaggccatacag
accatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtagctaatgaa
gagcgattggtcaacaagtccatgggtctcctgaacaaccagaaattctgggcaggaata
gtgtttcctgacatcacccgtagcaacagcactgacctgcctcccaacgtcaactacaag
atccgcatggatatcgataatgtggagaggacgaacaagattaaagatgggtattgggac
cctggtcccagagcagaccccttcgaggatcttcggtacatctggggcggattttcctac
ctgcaggacgtcattgagcatggaatcatcagagccataactggcaccaaggagaggaca
ggcgtctacattcagcagatgccttacccctgttacgttgatgacatgttcctgcgggtg
atgagtcgatcgatgcctctcttcatgaccttggcgtggatgtactccgtggccatcatc
atcaagggcgttgtgtatgagaaggaggcgaggctcaaggagaccatgaggatcatggga
ctgaacaacggcaccctgtggctcagctggttcatcagcagtttaatcccactgctgatc
agcgccggcctcttggtgatgttattaaagatgggcaacctgctgccttacagtgaccca
ggtgttgtgtttcttttcctgggatcgtttggcgtagtgaccatcatgcagtgtttcctc
atcagcaccctgttctctcgtgccaacttggcagctgcctgcggtggcatcatctacttc
actctctacctgccctatgtgctgtgtgtcgcttggcaagactatgtcggctttggggcg
aaattagttgtgagtctgctgtctcctgttgccttcgggtttggctgtgaatactttgcc
ctgttcgaggagcaaggggttggtatccagtggtcgaatctgctggccagccctctggag
gaagacagctacaatctgaccacctctatctgcctcatgctgtttgacgcttttctctac
ggagtaatgacctggtacatcgaagctgtgtttcctggtcagtttggtatccccaggcct
tggtacttccctttcactaagacgtactggtgtggggagaaagagaacaaaaacttttcc
acccttatgtcaaagaaggacaatgctgaagctgtgtgcattgaggaggagccgggccac
attgacccaggtgtttacatcgagaatctggtgaaggtctacagccatggaaacaagctg
gctgtagacggactgtccctgaggttctacgaaggacaaatcacctccttcctgggacac
aacggagctggcaagaccacaactatgtcaatcctgacggggctgttcccacccacatct
ggcacagcctacatcctcggcaaagacatccgcactgagctcagcaccatccgacagaat
ctgggcgtctgtccccagcacaacgtgcttttcagcatgctgacagttgaagaacacatc
tggttctacgcccgtctgaaggggctgtctgaggagaaggtgaaggccgaaatggagcag
attgtgaacgatgttggactgcctcacaaacgaaaatcccgctcctgcaccctgtccggt
gggatgcagaggaagctgtcagtggccctggcttttgttgggggctcaaaggttgtgatt
ctggatgaacccacggctggggtcgatccttatgcacgcaggggcatctgggacctgctg
ctcaaatacagacagggccgcacaatcatcctgtccactcatcatatggacgaggccgac
atcctgggtgaccgcattgccatcatttcccacgggaagctgtgctgcgtaggctcctcg
ctcttcctgaagactcaactggggacagggtactacctgaccctggtcaagagagactac
gacttggcacttcagtcctgcaggaattctgccagcaccgtcagctacagcaagaaaaca
gagaaggaggacagcgtctcagagagcagttcagatgctgggttgggcagtgaaccggag
agtgaaaccaccactgttgatgtctccctcatctcaaatgtgatattcaagcacgtcccg
gaggctcgcatggtggaggatctcggccatgagatcacctatatcttgccctacaagtca
gctaaagacggggcctttgtggagctcttccatgagctggacgaccgactcaccgaccta
ggaatatccagttatggaatatctgataccaccctggaagagattttcctgaaagtggct
gaggacagtggagtcgacgctgtcgagctttcagacggagtcgtacccaccaggactcgt
cgccgccacgcctttggagaccaccagagctgcctgaagcccttcaccgaggatgacttt
gatttcaacgactctgaaggtgacccagagtcccgtgagaccgactggctcagtggaaca
gatggcaaaggttcatacaaggtcaaaggctggagtctgaagagacagcagtttgttgca
ctactctggaaacgattcctctatgcacggcgctccaggaaaggattctttgcccagatt
gttctgcctgcggtgtttgtgtgtatcgccctggtgttcagtctgatcgtccctccattt
ggaaagtaccccagtctggctcttgatcccggcatgtatggagaacagtttaccttcatc
agtaatgacttacctgaggacccccacatcaataaactactcggagctctgacagaaaaa
cctggatttggaacacgctgcatggaaggagaacccatacgggacacccgctgcactgaa
gtagaggacgagtggtccgccccgcaagtctctgaaagtgtgaaggagatgttcgaccaa
ggcaactggaccatggagaatccatctccagtgtgcgagtgcagctgcgaagggcgcaag
aagatgctgccggagtgtccggcaggcgctggcggacttccacccccacagatgaagatc
agcgacaaagacactctccagaatttgactggcagaaacatctcagactatcttgtcaaa
acctacgctcagattattggaaagagcctgaagaacaagatttgggtcaacgagttcaga
tacggtggcttctcgctgggtgccaggggctcgcagcttctgtccaacagagatgaaatt
gacgatgcaatcgctcacctgaggagacgcttccgcctggagaggggcactgcagcagat
cgcttctttcacagtctctccacttttgtccaaggattggacaccaagaataacgtcaag
atatggtttaacaacaagggctggcacagcatcggctctttcctcagtgtgatgaacaat
ggcatcctgcgggcgagtctgccagctggcaaagaccccactaagtttggcataactgcc
tacaatcacccgctcaacctcaccaaggagcagctctcgcaggtcgcattgatgacgaca
tcagtggacgttttggtgtccatctgcgtgatctttgcaatgtcctttgtcccggccagc
tttgtggttttcctcatccaggagagagtgaacaaagcgaaacacatgcagttcatcagt
ggggtgcagcctctcctctactggctggccaactttgtctgggatatgtgtaactacatc
gtcccagccacattggtcatcataatctttgtatgttttcaacaagacgcctacgtctcc
tccaccaatctgcctgtgcttgccctcctgctactgctctacggatggtcgatcacccct
ctgatgtacccagcgtcatttttctttaagatccctagcacggcctatgtggttctgacc
agcgtcaacatactgataggaatcaatggcagcgtctccacatttgtacttgagctgttt
gggagcaatgagatcggtggtatcaacgatatcctgaagaacgtgttcctcatcttccca
cacttctgtctgggccgaggactgattgacatggtgaagaatcaggcaatggctgatgct
ttggagcgatttggtgaaaaccggttccgttcgcctctggcctgggacatggtgggaaag
aatctgtttgcgatggccgtagagggcgctgtcttcttctgcatcaccgtcctcattcag
tatcgcttctgcatcaagaacaggtcgtctgccagtcacctgaagcctattggagaagaa
gatgaggacgtggccagagagcgacagaggatccttggtgggggaggacagtcggacatc
cttgagctcaggcagcttactaagatttacaagaggaaacagaagccagcagtggaccgg
ctgtgtgttggcatcccccccggagagtgcttcggtttgctcggagtgaatggagcaggg
aaaaccagcaccttcaaaatgctgacaggagactccttggtgacaagtggagaggcctat
ctggctggcaaaagtgtaacggcagagatcgatgaagtgcatcagaacatgggctactgt
cctcagtttgatgctatcaatgacctgctgactggcagagagcatctcgagttttacgcc
atcctgagaggagtgccggagaaggaagtctgcgaggtggcagagtggggcatccggaag
ctgggcttggtcaaatatgtggacaagtcggcaggcagctacagcggaggaaacatgagg
aaactgtctactgccatcgctctgattggaggaccgcctgttgtgtttctggatgaacca
actacaggcatggacccgaaggcacgtcgggccttatggaacaccatcctgagcatcatc
aaagaaggacgatctgtcgtcctcacatctcacagtatggaggagtgtgaagcgctttgc
accaggatggccatcatggtcaacggcaggttccgctgtctgggcagcgtgcagcacctc
aaaaacaggtttggcgatggctacaccatcatcctacgggtggcagggccggacccagac
ctccggccggcgatggagttcatcgaacaggagcttccaggcagcacgctgaaggagaaa
caccgcaacatgctgcagtaccagctgccgtcgtctcgcacctctctcgcgcgcatcttc
tccctgctcgccaagaacaaggagacactcagcattgaggactactccgtctctcagacc
actctagaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccatctgaaa
gacctccatctgagtaagcgggacgctgtggtagtggacttttcccagctaaactcctta
ctcacggacaacaagactcgggagagctgcgtctga
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integrated database retrieval system
