Scophthalmus maximus (turbot): 118312232
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Entry
118312232 CDS
T09850
Name
(RefSeq) calpain-2 catalytic subunit isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04218
Cellular senescence
smau04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118312232
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118312232
04217 Necroptosis
118312232
04218 Cellular senescence
118312232
09144 Cellular community - eukaryotes
04510 Focal adhesion
118312232
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118312232
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
118312232
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118312232
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118312232
NCBI-ProteinID:
XP_035492551
LinkDB
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Position
8:complement(355700..363564)
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AA seq
719 aa
AA seq
DB search
MIMWTLSRSLTRPAQTSVMTSAAAAQVRRKAREEDAVGSWINAVPFNQQDFEQLRSECLQ
SGSLFCDPTFPADWDALGYNQLGRHSSKTVGVEWKRPSELCSDPQFTVDEAKRTDICQGA
LGDCWLLAAVASLTLDPQILSRVVPPGQSFTSQYAGIFHFQLWQYGEWVDVVVDDRLPTR
DGKLLFVHSAEGREFWSPLLEKAYAKVSSSYEALTGGSSVEGFEDFTGGIAESYDLKEAP
PFLFNIMTKALKLGSLLGCSIDISSSYDTEAITGQKLVKGHAYSVTAAERVLRCGSSVEL
LRIRNPWGQVEWTGAWSDESTEWDDVEEEERRKLDHSADDGEFWMSYADFLQQFSRLDIC
NLTPDTLTSDEVGHWNCAEFEGVWRVGSTAGGCRNNAATFCSNPQFLVRLQDVDDDPHDG
EDGCTVLVGLMQKDTRRERRFGRDLNTIGFTIYKVPDEFEGRSNVHLGPDVLLRTAAVAR
SQNFINLREVFDRFKLPPGEYIIIPSTFDPHLKGSFILRVFTEKEAHSSPMEEDLDADID
EPDVGHNDVDPHFKRLFVQISGNDSEISAFELQQILDKVVAQRSDVKTNGFSLQTCRSII
SLLDMDGDTKLGLVEFHTLWTKIQRYLEVFKGHDSDSSGTVSSHEMRAALAEAGFQVNSA
VIQEVVGRFADSSFAIDFDSFIGCLIRLELLFRVFRTLDKKNRGQIELDLQQWLCLAIN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgataatgtggactctcagcagatccctgactcgacccgctcagacctcggtgatgacg
agcgcggcggcggcgcaggtcaggaggaaggcccgggaggaggacgctgtcggcagctgg
atcaacgccgtgcccttcaaccagcaggactttgagcagctgcggagcgagtgtctgcag
agcggctcgctcttctgtgacccgaccttccccgccgactgggacgcactgggatacaac
cagctgggacggcactcatccaagaccgttggcgtggagtggaaacggccgtcggagctg
tgttctgatcctcagtttactgttgatgaagcaaagagaacagacatctgccagggagct
ctgggtgactgctggctgctggccgccgtcgcctctctgactctggaccctcagattctg
agcagagtggtacctcctggtcagagcttcacgtctcagtacgccggcatcttccacttc
cagctgtggcagtacggggagtgggtggacgtcgtcgtggacgaccggctgccaaccaga
gacgggaagctgctgtttgtccactcggctgagggacgagagttctggagccccctgctg
gagaaggcctacgccaaggtgagcagttcgtacgaggctctgaccggaggctccagcgtc
gagggttttgaggatttcaccggaggcatcgccgagagctacgacctgaaggaggctccg
cccttcctgttcaacatcatgacgaaagctctgaagctcggctcgctgctcggctgctcc
atcgacatttccagctcgtacgatacggaggccatcaccggtcagaagctcgtgaaaggc
cacgcctactccgtcactgcagctgagcgggtgcttcgctgtggttcttctgtggagctg
ctgaggatcaggaacccgtggggtcaagtggagtggaccggagcctggagcgacgaatcg
acggaatgggacgacgtggaggaggaggagaggaggaagctggaccactctgctgacgat
ggagagttctggatgtcctacgccgacttcctgcagcagttttcccgtcttgacatctgc
aacctgacgcccgacacgctgactagtgacgaggtcggtcactggaactgcgctgagttt
gaaggcgtgtggagggtcggctccaccgccggcggctgcaggaacaatgccgccactttc
tgctccaaccctcagttcctcgtccggctgcaggacgtggacgacgaccctcacgacggc
gaggacggctgcaccgtcctggtcggcctgatgcaaaaagacactcgcagggagagacgc
tttggacgagacctcaacaccatcggattcaccatctacaaggtccctgatgagtttgaa
ggtcgcagtaacgtccacttgggcccggacgtcctgctgaggacggcggctgtggctcgc
agtcagaacttcatcaacctgagggaggttttcgaccgcttcaaactgccgcctggagag
tacatcatcatcccttccaccttcgatccgcaccttaaaggaagcttcatcctgagggtg
ttcaccgagaaagaggcccacagcagtccgatggaagaggacctagacgccgatatagac
gagcctgatgtcggacacaacgacgtggaccctcacttcaaacgtctctttgtccagatc
tcaggaaacgactctgaaatttcagccttcgagctccagcagattctggacaaggtggtc
gctcagaggtctgatgtgaaaaccaatggtttcagtctgcagacctgtcgcagcatcatc
agcctgctggacatggacggtgacactaaacttggtctggtggagtttcacactctgtgg
acaaagatccagagatacctggaagtctttaagggccacgactcggacagttctggtaca
gtgagcagtcatgagatgagagcagctctggctgaagctggtttccaggtgaacagcgct
gtgatccaggaagtcgtcggccgattcgctgactccagtttcgccatcgactttgactct
ttcattggttgtttgatccgtctggagcttctcttcagagtgttcagaactcttgacaag
aagaaccgggggcagatcgaactggacctgcagcagtggctctgcctcgccatcaactaa
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