Scophthalmus maximus (turbot): 118312236
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Entry
118312236 CDS
T09850
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04218
Cellular senescence
smau04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118312236 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118312236 (capn2b)
04217 Necroptosis
118312236 (capn2b)
04218 Cellular senescence
118312236 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118312236 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118312236 (capn2b)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
118312236 (capn2b)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118312236 (capn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
118312236
NCBI-ProteinID:
XP_035492558
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All DBs
Position
8:365124..379393
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AA seq
697 aa
AA seq
DB search
MSGVASTLAKQRAMAAGFGTNANATRYLNQDFAALRAQCRSAGKLFCDPSFPAAPSALGF
NELGPASHKTRGVTWRRPTELVSSPEFIVGGATRTDICQGALGDCWLLAAIASLTLNEYV
MARVVPSDQGFGDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGREFWSAL
LEKAYAKVSGCYESLSGGSTTEGFEDFTGGIAENYDLQRPPSNMFQIIKKALEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVNYRGRQEKLVRMRNPWGQVEWTGAWSDG
SSEWSSVQGECPHANAEDGEFWMSFNDFLRNYSRIEVCTLTPDTIGDDSVKHWSVSKFDG
TWRRGSTAGGCRNHPYTFWTNPQFVIRLEEEDDDPDDGEVGCSFLVGLIQKNRRRLRKQG
EDMHTVGFAIYEVPKQFHGQGQVHLDKNFFLSHAQTAKSETFINLREVSSRFKLPPGEYL
IVPSTFEPHLNGDFCIRVFSEKQTETVPCDDPVEAELDDETVSDEEVDAGFRGLFAKLAG
DDMEISAVELRTIMNKIVAKRTDIKTDGFSMETCRIMVNLMDDSGNGKLGLGEFATLWKK
VQRYLSIYKNNDSDNSGTMSTPEMRVAFKDAGFTLNNSIYQLLVARYSDPDMTIDFDNFV
ACLMRLEMMFKIFRKLDAHNSGSIELDFNQWLNFAMI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgtcgcgtccaccctcgccaagcagcgggccatggccgccgggttcggcacc
aacgccaacgcgacgcggtacctgaaccaggacttcgccgcgctgcgcgcgcagtgtcgc
tccgccgggaaactcttctgcgacccgagcttccccgccgcgccctcggcgctgggcttc
aacgagctgggccccgcctcccacaagacccgcggcgtgacctggaggaggcccacggaa
ctggtctccagccctgagttcatcgtgggcggagccaccaggaccgacatctgccaggga
gctctgggtgactgctggctgttggcggccattgcctccctgaccctgaatgaatatgtg
atggcaagggtcgttccctccgaccagggcttcggtgacgactacgccggcatcttccac
ttccagttctggcagttcggggagtgggtggacgtggtgatcgacgaccgtctgcccgtc
aaagacggagagctgatgttcgtccactcggccgaggggagggagttctggagcgctctg
ctggagaaagcctacgccaaggtgagcggctgctacgagtcgttgtctggtggttcgacc
accgagggcttcgaggatttcacgggaggcatcgctgagaactacgacctccaacgacct
ccgtccaacatgttccagatcatcaagaaggcgttggaggccggagcgctgctgggttgc
tccattgacatcacgagcgccgcagactccgaggccgtcactcgtcagaagctggtgaaa
ggccacgcctactcactgactggtgctgtggaggtgaactaccggggtcgacaggagaag
cttgtgaggatgaggaacccctggggtcaggtggagtggaccggagcctggagcgacgga
tcatcagagtggagctctgtgcagggagaatgtccacacgccaacgcagaggacggggag
ttctggatgtccttcaacgacttcttgcgtaactactctcgtatcgaggtgtgcaccctg
acccccgacaccatcggtgacgactccgtcaaacactggagcgtcagcaagttcgacggc
acctggaggagagggtccacggccggaggctgcaggaaccacccctacactttctggacg
aatccacagtttgtgatcaggctggaggaggaggatgacgacccggatgatggtgaagtg
ggctgcagcttcctggtcggtctgatccagaagaaccgcaggaggctgcggaagcaaggc
gaggacatgcacaccgtcgggttcgccatctacgaggttccgaaacagttccacgggcag
gggcaggtgcacctggataagaacttcttcctgagccacgctcagacggccaagtcagaa
accttcatcaacctgcgcgaggtcagctctcgcttcaaactgccgccgggcgagtacctg
atcgtcccatccaccttcgagccgcacctcaacggagacttctgcatccgggtgttctcc
gagaagcagacggagactgtaccgtgtgacgatccagtcgaagctgaactcgatgacgag
acggtgtctgacgaggaggtggacgcaggattcagaggcctctttgctaaactcgccgga
gatgacatggagatctcggccgtggagctcaggaccatcatgaacaagattgtcgccaaa
agaactgacatcaagactgacggtttcagtatggaaacctgcaggatcatggtcaacctc
atggacgacagtgggaacgggaagcttggcctcggggagttcgctaccttgtggaagaag
gtccagagatacttgtccatctacaagaacaatgactcggacaactcggggacgatgagc
acaccagagatgagagttgccttcaaagacgcaggcttcactctcaataactccatctac
cagctgctggtggctcggtactccgaccccgacatgaccatcgacttcgacaacttcgtg
gcctgtctgatgaggctggagatgatgttcaaaatcttcaggaagctcgatgcccacaac
agcggctccatcgagctcgacttcaaccagtggttgaacttcgccatgatctga
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