Scophthalmus maximus (turbot): 118312373
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Entry
118312373 CDS
T09850
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118312373 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118312373 (setdb2)
Enzymes [BR:
smau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118312373 (setdb2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118312373 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118312373 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
118312373
NCBI-ProteinID:
XP_035492802
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All DBs
Position
1:31400467..31412073
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AA seq
631 aa
AA seq
DB search
MGQVEQAGQSTCRATRVHTERAQTFWSEEDVDQVFRRVVVYLDHLKRVLKDNTASDRELV
QALKLLEVLDLCPPDSAQDTTVVQVVIGAGELLPADPPPHSPTSSSCSPPPPSNGLSSST
APPAVREELLPPLEYQPHACCKTCLSSLPRMPQYSPLFWGQNPLKVPLLCGFKRLMSPLR
GAEPVVSEGVVYKAPCGQSLHKLDDVMRFLLATESYDVLQVDFFTFNPSVQLDPPVAPGP
RRPELDLSRGVEPTPVELCTGDGGTRPADFRYRRDRWPHGCFLSRGSSLFSSCCDCVDGC
TDAQRCACVATTRGGRRYSHHRLTEPVATGLYECGPWCGCDRARCQNRLVQRGIRVRLQV
FQTDDRGWGVRCRDDLDRGTFVCIYAGVILKRVQALLEPSPPKLTRCDLPSDDEVEVVTE
WLAPPVLEGRSNLLESPPPPTSPPTSPPLHVPVIQRPLDANAAASSSSTPQVLTSLSGAT
EPPLSPSGELIERRPSGDNVPSVGVNGFVMNKRGVKREAAAESVCVLDASREGNVSRFIN
HSCDPNLFVQSVFTDSHDDAFPVVAFFTSRTVKAGTELTWDYSAHACAASSIQKQEVTCL
CGSDGCRGRFAVNENMCDVCEVKGQGAVEAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgggccaggtagaacaagctggacagagcacctgtcgggccacacgggtccacacagag
cgggcccagaccttctggtccgaggaggacgtggaccaggtcttcagaagggtcgtggtg
tacctggaccacctgaagagagtcctgaaggacaacacggcctcggacagagaactggtc
caggccctgaagctgctggaggttctggacctgtgtcctccggactcggctcaggacaca
accgtggtgcaggtggtcatcggtgcaggtgagctgctgccagctgacccccccccccac
agccccacctcctcctcatgctcccccccacccccctctaatgggctgtccagctccaca
gcgcctcctgctgtcagagaggagctcctgcctccactggagtaccaaccacacgcctgc
tgcaagacctgcctgtccagtttacccagaatgcctcagtactctccactgttctgggga
cagaaccctctgaaggttccgctgctctgcggctttaagaggcttatgtcacccctgagg
ggggcggagcctgtggtctcagagggcgtagtctacaaagctccttgtggtcagagcctc
cataaactcgacgacgtgatgcgtttcctgttggcgacggagagctacgacgtgctgcag
gtcgacttcttcaccttcaacccctctgttcagctggacccccccgtggcgccgggcccc
cggcgtccggagctggacctgagtcgtggcgtggagcccacgccggtggagctgtgcacc
ggggacggcggcacccggcccgccgacttccgctacaggagggaccgctggccgcacggc
tgcttcctgagccgcggctcctcgctgttcagctcctgctgcgactgcgtcgacggctgc
accgacgctcagcgctgcgcctgcgtcgccacaaccagaggagggcgccgctacagccac
caccggctgactgagcccgtcgccaccgggctgtatgagtgtggtccgtggtgcgggtgc
gaccgggctcgttgtcagaaccgtctggtccagagagggatccgagttcggctccaggtc
ttccagaccgacgaccgcggctggggcgtccgttgccgtgatgacctggaccgcggcacg
tttgtgtgcatctacgcaggtgtgatcttgaagcgggtccaggcgctgctcgagccttcg
ccgccgaagctgacgcgctgcgacctcccgtcagacgacgaggtggaggtcgtcaccgag
tggctggccccgcccgtcctggaggggcggagcaacctgctggagagtccgcccccaccc
acgtccccgcccacttccccccccctgcacgtcccggtgatccagaggccgctggacgcc
aacgccgccgcctcctcgtcctccacaccgcaggttctgacgtcgctgtcgggggcaacc
gagccgccgctgtcgccttcaggtgagctgattgaacgccgtccgtcaggtgacaatgtg
ccatctgtcggggtgaacggtttcgtgatgaataagaggggtgtgaagagagaggcggcg
gcagagtcagtttgtgtcctggacgccagcagggagggaaacgtgagccgcttcatcaac
cacagctgtgatcccaacctgttcgtccagagcgtcttcaccgactcgcacgatgacgcc
ttccccgtcgtcgccttcttcaccagcaggacggtgaaggccggcaccgagctcacctgg
gattactctgcccacgcatgtgcggcctcctcgattcagaaacaggaagtgacctgtctc
tgcggtagcgacggttgccggggtcgattcgccgtcaacgagaacatgtgtgacgtctgt
gaggtcaaaggtcaaggagcagtcgaggcccagtga
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