Scophthalmus maximus (turbot): 118312627
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Entry
118312627 CDS
T09850
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118312627 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118312627 (fip1l1b)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118312627 (fip1l1b)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
118312627
NCBI-ProteinID:
XP_035493294
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All DBs
Position
8:12626161..12635974
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AA seq
573 aa
AA seq
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MSAEEGDKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEEAAAHAT
GNGVASEATGEAAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTTG
SRPYGQAMKMKGVDLDGPGNINGVPVVEVEMESFEEKPWRKPGADLSDYFNYGFNEDTWK
AYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNDKDISSLPVHTSKPDFPSPASLYKSA
VSQVTRISPPQWTGPPAPDMSYYTISPPQWTGPPAPDMSDYTKSGTIDVIGGGTATISRV
EGRRRHNLEGNNIQVISEHSTTDAEPTPAKMPTFFPPGPLPPNIPPPPFLPPPPNVSTAP
PLIPPPRLPITVPPPGFPPPPSGPPPAIIPTMDSGHPGGYDGRSIPPYPFPQGAYPPPMA
GGVPPPWPPMMDNSKPWDYYSRRDDKREKERERPRERTHEREREREHSPSAISYTSDEER
YRYREYQERAYAGERHRERASREKEERHRDRRHREKEEGRHKSSRSSSSRRRHDSEEGDS
HRRHKHKKSKRSKEGKEAGEDIGADQENQEAME
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaaggggacaaaacagccaccaccgatgccagcgcaggagacgaggag
gaggaatggctgtacggagatgagtctgagagcaaagacgaggatgaagaggccaagctg
aacgcggcagtcagtgcacctgctgatgcttccacagaggaggctgctgcacacgctaca
ggaaatggagtggcctctgaggccacaggcgaagcagcaggtgaagacgtggacagtgac
agcgacagtgatgatgacgacgatgatgtccgggtcaccattggagacattaaaactgga
gcaccacagtacacgacttatggagctcctcctgtaaatctcaacataaagacaacaggc
tccagaccttacggacaagccatgaaaatgaagggagtggatcttgatggtcctggaaac
atcaatggggttccagtggtggaggtggaaatggagtcctttgaggaaaaaccctggaga
aagccaggagctgatctgtccgactactttaactatggcttcaatgaagacacgtggaag
gcttactgtgaaaaacagaagaggctgcggatgggtctggaggtctccacagtcggctct
gttacgagtaaaatcactgttcagcaaggcaggacaggcaacgataaagacatatccagt
ttgccagttcatacctcgaagccagatttcccatctcccgccagcctgtacaagtctgcc
gtcagtcaggtcaccaggatctctccccctcagtggactggcccgcctgccccggacatg
tcctattatacgatctctccccctcagtggactggcccgcctgctccggacatgtccgat
tatacaaagagtggtaccatcgatgtgatcggtggagggacggccaccatcagcagggtt
gaagggcgacgccgacacaacctagaaggcaacaatatccaggtgatctctgaacactcc
acaacagatgctgagcccactccagcgaagatgcccaccttcttcccccctggacctctt
cctccaaacatacccccacctccatttctccctccccccccgaatgtcagcactgcaccc
ccgctcatcccgccacccaggttgcccatcacagtccctcctcctggttttcctcctcca
ccaagtgggcctccacctgctatcatccccactatggacagtggccaccctggaggttat
gatggacgctccatccctccgtacccgttccctcaaggtgcttaccctccacccatggcc
ggaggcgtgcctcctccgtggcccccgatgatggacaactccaaaccctgggattattat
tcccgtcgagacgacaagagagaaaaggagagagagagacccagggagaggacacatgag
cgggagagagaacgggagcacagtccttcggctattagctacaccagcgacgaagagcgg
tatcgttaccgtgagtaccaagagcgtgcctacgcaggagagcgccatcgtgaacgcgca
agtcgagaaaaagaggaaaggcacagagacaggcggcacagagagaaagaggagggacgc
cacaagtcctcacgcagcagcagcagcaggaggaggcacgacagcgaggaaggcgacagc
caccgaaggcacaaacacaagaagagcaagaggagcaaggagggcaaagaggccggcgag
gatatcggcgcagaccaagaaaaccaggaggccatggagtag
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