KEGG   Scophthalmus maximus (turbot): 118312714
Entry
118312714         CDS       T09850                                 
Symbol
si:ch211-79m20.1
Name
(RefSeq) trithorax group protein osa
  KO
K17386  platelet-derived growth factor subunit B
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04010  MAPK signaling pathway
smau04020  Calcium signaling pathway
smau04510  Focal adhesion
smau04518  Integrin signaling
smau04540  Gap junction
smau04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118312714 (si:ch211-79m20.1)
   04020 Calcium signaling pathway
    118312714 (si:ch211-79m20.1)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    118312714 (si:ch211-79m20.1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118312714 (si:ch211-79m20.1)
   04540 Gap junction
    118312714 (si:ch211-79m20.1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118312714 (si:ch211-79m20.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:smau04052]
    118312714 (si:ch211-79m20.1)
   00536 Glycosaminoglycan binding proteins [BR:smau00536]
    118312714 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:smau04052]
 Cytokines
  Growth factors (RTK binding)
   118312714 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:smau00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   118312714 (si:ch211-79m20.1)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 118312714
NCBI-ProteinID: XP_035493444
LinkDB
Position
8:3297585..3313189
AA seq 575 aa
MRSWVPLLLLLAALSAARLRLGSAEGDPLPPSLVDLVRNSPISSVDDLKLLLQQETNAIE
EEEDEHDLPTNHTHGRYPRSLVEAQQAQQAVCKVRTEVMEVTRSMLDRRNANFMLWPPCV
EVQRCSGCCNTRHLQCVPVVTSSRYLQVIKIQYINRKAHYDKAIISVEDHVSCRCQPATS
SSSSSSSSSSSSLPIIHSSVQSNPGPPQPPPQQPPPSSHLPRSVHPAPPKTHASKADLHR
HDDLKHNQQRYHAEEREPVARQWQQGSYTQLVHWTQPRAHGQAPPAHVQPAARQPIAGVL
GSVGGWPSEARAEHSVMGSAQPVALGSGYDGSREEGSVHVANGGGGEGHHPDHVQRQQQV
LEHQQRQHQQQHPYHHQPHYPQQYSHGGAEDPELRTQYRLNAPQSDSASPPGGPAQPPES
EQSPTRPPTANQKDSVTSPKDTREVTTHKRTETETVSQKEGGEREESGSANSGDSANRGA
ETASRPTGEDGHLTEEERRLKLLEMVQSAPDKQTHLHPHHPQQTPKPTTVKTAASTVAPA
SPPSARQAPFRPAAPRRRRKHRKRISKAAIRAMIM
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgaggtcctgggtcccgctgctgctgctgctggccgcgctctcggcggcacgtctgcgg
ctcggcagcgctgagggcgatcctctccctccgtcgctggtcgacctggtgaggaactcg
cccatctcctccgtggacgacctgaagctgctgctgcagcaggagaccaacgcaatagaa
gaggaggaggacgagcacgaccttcccaccaaccacacccatggcagataccctcgaagt
ctcgtggaggcgcagcaggcgcagcaggcggtgtgcaaagttcgcacggaggtgatggag
gtgacccgctccatgctggaccgccgcaacgccaacttcatgctgtggccgccgtgcgtg
gaggtgcagcggtgctcgggctgctgcaacaccaggcacctgcagtgcgtccccgtcgtc
acgtccagcagatacctgcaggtgataaagatccagtacattaacaggaaggcccactac
gacaaagccataatctcggtggaggatcacgtgagctgcaggtgccagcctgccacatct
tcctcgtcctcctcatcttcttcttcctcctcgtcccttcctatcattcactcctccgtc
cagagcaaccccggccccccgcaaccgccgccgcagcagcctcccccgtcctcccacctt
ccccggtcggttcaccccgctccgcccaagactcacgcctccaaggccgacctccaccgc
cacgacgacctgaagcacaaccagcagcgctaccacgcggaggagcgtgagccggtggcg
aggcagtggcagcagggcagctacacccagctggtgcactggacgcagcccagggcgcac
ggccaggcgccgcccgcgcacgtgcagccggcggcgcgccagccgatcgccggggtgctc
gggtctgtcggcggctggccgtcggaggcgagggcggagcacagtgtcatggggagcgcg
cagccggtcgcgctcggcagcgggtacgacgggagcagggaggaaggcagtgtgcacgtg
gcgaacggcggcggcggcgaagggcatcatcccgatcacgtccagaggcagcagcaggtg
ctagagcaccagcagaggcagcatcagcagcaacacccgtatcatcaccagccgcattat
ccgcagcagtacagccacggaggagcggaggacccagagctgaggacgcagtatcgactc
aacgctccccagtcggacagcgcctccccgcccggcggcccggcccagccgcccgagtcg
gaacaaagccccacccgccctccgaccgccaatcagaaagactcagtgaccagcccgaaa
gacacgcgcgaggtcacgacccacaaacggacggagactgagacggtcagtcagaaagaa
gggggcgagagggaggagagtgggtcggccaacagcggggactcggccaatcggggggcg
gagacggcctctaggccgaccggagaggacggtcacttgacagaggaggagaggagactc
aaacttctggagatggtacagagtgcaccggataaacagactcaccttcatccgcatcat
ccgcagcaaaccccaaagccgacaacagttaaaacagccgcctccactgtggctccggcg
tcgccgccctccgcgcgccaggcgccgttccgtccggccgcgcctcgccgcaggaggaaa
caccgcaaacgcatcagcaaggccgccatcagagccatgatcatgtag

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