Scophthalmus maximus (turbot): 118312751
Help
Entry
118312751 CDS
T09850
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X2
KO
K06839
slit 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118312751 (slit2)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118312751 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
LRRNT
Laminin_G_2
Laminin_G_1
LRR_9
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
EGF_DL_JAG
Laminin_G_3
EGF_Teneurin
EGF_3
JAG1-like_EGF2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118312751
NCBI-ProteinID:
XP_035493501
LinkDB
All DBs
Position
8:11177643..11309886
Genome browser
AA seq
1561 aa
AA seq
DB search
MVGALSPVGPGRSPATARGLLAAVLVLVLVLSGGADGQPCPTQCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAVFPELLFLGTTKLYRLDLSENQILGVPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFACTGHQTTSSSSCSVLQCPESCTCSNNIVDCRG
KGLSEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLR
SLNSLVLYGNKITEISKGLLEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKL
QTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRI
GQIKSKKFRCSGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLEN
IHHRMLKGLGGLRTLMLRSNRLSCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSL
STLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGN
DENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVPVELSEY
KHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGND
ISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCTGPGDMTDKL
LLTTPSKKFTCTGPVDMSIQAKCDPCLSNPCKNDGTCSNDPVHYYRCTCPYGFKGQNCEE
PIHACIGNPCQNGGTCHLKEGEESNFWCVCSEGFEGDACEINIDDCEDNDCENNSTCVDG
INNYTCMCSPEYTGELCEEKLDFCAPELNPCQHESKCILTPQGYKCECTPGFVGEHCELD
YDDCEENKCQNGGQCIDAINGYTCICPEGNSGLFCEFSPPMVLPRTSPCDNHECLNDAQC
VVVETDPSCQCLHGYEGERCETLVSVNFVNRQSYLQLPSSLLSPQTNISLQIATDEDSGV
LLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQTLSLSI
DGGTPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSALQHSSGGRNGTSFHGCLRNL
YINGKLQDLGAGLGPGAPGSGTAQSTTRQWLGQGVEPGCQPCQRGACIQGECHATGHRGF
TCTCNPGWTGAVCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDEQDQDAA
NPCSLSRCKHGKCRVSGLGEAYCECNSGYTGDACDKEVACRGERVRDVYQRQQGYAACQT
QEKVSRLECRGSCTGGAEGLGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCS
S
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgctccccggcgacagcgcgagggctg
ctggcggctgtcctggtcctggtcctggtcctgtccggcggagcggacggtcagccctgc
ccgacccagtgctcctgcaccggcaccacggtggactgtcacggccaagggctccgcagc
gtgccacggaacataccccgcaacacggagagactggacctgaatgcaaacaacctcacc
aaaatcaccaagacggatttcgcaggactgaggcatctgcgagtgctgcagctaatggag
aacaaaatcaccacgatcgagagaggagccttccaggacctgaaggagctggagagactg
cgcctgaatcggaataatctggccgtctttcccgagctgcttttcctgggaacgacaaag
ctttacagacttgatctcagtgagaaccagattctgggggttccgaggaaagccttcagg
ggagctgtggagatcaagaaccttcagttggactacaaccacatcagctgtattgaggat
ggagctttccgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagc
cgactgtctgtggccagtttcaaccacatgccaaagctcaggacctttcgcctgcactcc
aacaacctgcagtgtgattgtcacgtggcctggctgtcagagtggctgcgacaacgcccc
cgtctgggtctttatacgcagtgcatggccccgccacacttgaggggacacaacgtggcg
gaggtgcagaagaaggagtttgcctgcacaggtcaccagacgacatcgtcctcctcctgc
agtgtgttacagtgcccggagtcgtgcacctgcagtaacaacattgttgactgcagagga
aagggactgtcagaaatacccaccaacctgcccgaaaccatcactgagatccgactggag
cagaacgccatcaaggtgatcccggctggggccttctctccttacaagaagctgcgtagg
atagacttgagtaacaaccagatctcagagctggcctcggacgccttccaaggcctgcgc
tccctcaactctctggtactatatgggaacaagatcactgagatttccaaaggactatta
gagggactattttctctgcagctattgttactgaatgctaataagatagcatgtctgcgt
gtggatgcatttcaggacctccacaacctcaatctgctatcactgtacgacaacaagctc
cagaccatcgccaagggaaccttctcatcgctaagagccatacaaacgctacacttagcc
cagaacccgttcatctgtgactgccatctgaagtggctggctgactacctgcaggacaat
cccatcgagacgagcggtgcccgctgcaccagccctcgacgacttgccaacaaacgaatc
ggacaaatcaagagcaagaagttccgctgctcaggtactgaggattaccgcagcaagctg
ggaggggactgcttcgccgacttggcctgccccgagaagtgtcgctgcgagggcaccacg
gtcgactgctccaaccagaaactcaccaaaataccagaccacattcctcagtacaccgca
gaactgcgtctcaacaacaatgaattcactgtgctcgaggcgacggggatcttcaaaaag
ttgcctcagctgaggaagattaacctgagcaataaccgtatcactgacatagaggagggg
acgtttgaaggagcctcaggggtcaatgagctgattctgacctccaacagactggagaac
atacaccaccgcatgctgaagggactgggtggcctccgcacacttatgctgaggagtaac
cgactcagctgtgtgagtaacagcagcttcgtggggctgagctctgtgcgcctcctgtcg
ctctatgacaaccagatcacctctatgaacccgggagccttcgacactctgcactccctg
tccacactaaaccttctggccaatcccttcaactgtaactgtcatctggcttggctcggg
gattggctgaggaggaaacgcatcgtcaccggtaaccctcgctgccagagtccctacttc
ctgaaggagatccccatccaggatgtggctgttcaggactttgcctgtgaagacggtaat
gatgagaacagctgttctccggtgctcaggtgcccagcggagtgttcctgtctggacact
gtggtgcgctgcagcaacaagggtctcaccactctgcccaaaggcctccccaaagagacc
actgagctatacctggatggtaaccacttcactcaggttcctgtggaactctccgagtac
aaacacctaacgctcattgacttgagtaacaaccagatcagcacgttgtccaaccacagc
ctcagtaacatgtccgagctgcttaccctaatcctcagctacaaccgcctgcggtgcata
ccagtgagggcgttcgacgggctcaagtctctgcgtttgctgtctctccacggtaacgac
atatcactgataccagagggagccttcaaagatctgtcatcgctttcccacctggctctg
ggcgccaaccctctgtactgtgactgccacatgcagtggctgtcagactgggtgaagagc
ggctacaaggagccgggcatagcccgctgcacgggccctggcgacatgaccgacaaactg
ctgctcaccacgccttccaagaagttcacctgcacaggcccagtggatatgagcatccag
gctaagtgtgacccctgcctgtcaaacccctgcaagaacgacggcacctgctccaatgac
cctgtgcactactaccgctgcacctgcccctatggatttaagggccaaaactgcgaggag
cccatccacgcctgcatcggtaacccgtgccagaatggtggaacctgccacctgaaggaa
ggagaagagagcaacttttggtgtgtgtgttcggagggcttcgaaggtgacgcctgtgag
atcaacatcgatgactgtgaagacaacgactgtgagaacaactccacctgcgtggatgga
atcaacaactacacgtgcatgtgctccccagaatacacaggggagctatgtgaggagaaa
ctggatttctgcgctccagagctgaacccgtgtcagcacgaatcgaagtgtattttgacc
cctcagggatacaagtgtgagtgcacgccgggcttcgtgggtgagcactgtgagctggat
tatgacgactgtgaagagaacaagtgtcagaacggcggccagtgcatcgatgccatcaac
ggatacacctgcatctgtccagaaggaaacagcgggttattctgcgagttctctcccccg
atggtccttcctcgcaccagcccctgtgacaaccacgagtgcctaaatgacgcgcagtgc
gtcgtcgtggaaacagaccccagctgccagtgtctccacggctacgagggcgaacgctgt
gagacgctcgtcagcgtcaactttgtcaaccgccagtcgtacctgcaacttccctccagt
ctcctctcgccgcagaccaacatcagcctacagattgccacagatgaggacagcggcgtg
ttattgtataaaggcgacaacgatcacattgctatggagctgtacaggggacgcctcagg
gtcagctacgataccgggtcctaccctccctctgctatttacagtgtggagacagtgaat
gatggcagttttcatgcggtggagctagtggcatcggaccagactctgtctctgtccatt
gacggcggaacgcccaaatccatcaactccatcagcaaacaatccacactcaatatagac
tctccactttacctgggagggatgccggagcgtgcgtcagcctctgggggtctgtcggcc
ctgcagcacagctcaggcggacgcaatggcaccagcttccacggctgcctccgtaacctg
tacattaatgggaagctccaggacctgggggccgggctggggccaggggctccgggctct
gggactgcacagagcaccaccagacagtggctgggccaaggggtggagccaggctgccag
ccgtgccagagaggtgcctgcatccagggtgagtgccacgcaacggggcaccgtggcttc
acctgcacctgcaaccccggctggacgggagcagtgtgtgaccagcaagtcaacaacccc
tgtgatggcaataagtgtatccatggtacctgccttccaatcaactcctattcttactcc
tgccgttgccagcctggttttgctggtgtcctgtgtgacgagcaggaccaggatgcagct
aacccctgtagtctgtctcgctgcaaacatggcaaatgcagagtgtcaggcctgggtgaa
gcatactgcgagtgcaacagcggatacacaggagatgcgtgcgacaaagaggtggcctgc
cgaggggaacgggtccgagatgtctaccagagacagcaaggctacgcggcgtgccaaacc
caggagaaggtctcccgtctagagtgtcggggcagctgcacggggggagcagaaggacta
ggcacctgctgcacccccctccgcagcaaacgcaggaaatacaccttccagtgcactgac
ggctcttcttttgtgcaggaagtggagaaagtggtcaagtgtggctgtacaaagtgctcc
tcataa
DBGET
integrated database retrieval system
