Scophthalmus maximus (turbot): 118312785
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Entry
118312785 CDS
T09850
Name
(RefSeq) protein jagged-1b-like isoform X2
KO
K06052
jagged-1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04330
Notch signaling pathway
smau04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118312785
04371 Apelin signaling pathway
118312785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
smau04090
]
118312785
CD molecules [BR:
smau04090
]
Proteins
118312785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
JAG1
DSL
EGF_2
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
Herpes_LMP1
Motif
Other DBs
NCBI-GeneID:
118312785
NCBI-ProteinID:
XP_035493576
LinkDB
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Position
8:complement(484873..510222)
Genome browser
AA seq
1281 aa
AA seq
DB search
MALSRSPAPLPLLLVLLSAALQVSSASGHFELQILSMQNVNGRLQSGACCDGPRDDGPRD
DRGQWDDGPRDDRGQWDDGPRDVRGQWDDGPRDDRGQRDDGPRDDRGQRCAADECDTYFR
VCLKEYQLKVSTAGPCSFGSASTPVLGGNSFTLRNTKSDDGARVVLPFSFAWPRSYTLIV
DALDFNNDSSSSSGAAIERAVHSGMINPGRQWQALKHDGPVAQFQLRLRLGCDEHYFGFG
CNKFCRPRDDFFGHYECDHNGNKTCLEGWSGPDCHTASCRQGCSAQHGSCKVPGECRCLY
GWQGEYCDQCIPHPGCVHGSCVEPWQCLCDTNYGGQLCDKDLNTCRTRQPCLNGGTCSNT
GPDKYQCSCPDGFSGVDCQRADHACLSSPCLNAGSCEETSQGFECRCAAGWTGASCSINV
DECLVNPCGHGGTCQDLVNGFRCTCPPQWTGRTCLIDANECDHDPCVNANSCRNLIGGYF
CECVPGWTGQNCDTNVDDCGAQCQNGATCKDLLSGYTCVCAAGFGGVHCERDVDECASGP
CLNGGRCHDEVNGFHCLCPPGSSGRRCQSDVDYCRRSPCQNGGQCFNLAADYVCKCPEDY
EGRNCSRLRDHCRTSPCKVIDSCTVAVASNSTASGVRLISSNVCGPHGRCRGHAGGQFSC
ECAEGFTGTYCHENINDCESAPCLNGGTCIDGVRQYQCVCAEGWDGPACLHNVDDCSSAP
CLNRGVCRDLVNGFYCECNGGWKGKTCHSRESQCDEWTCHNRGTCLDEGDAFRCVCAVGW
EGRSCNTVKNGVCLQSPCENGGTCVVGGASFSCVCKEGWEGATCSHNANDCSSHPCYNGG
TCVDGDNWYRCECSPGFSGPDCRINIDECQSSPCGFGSTCVDEINGYRCVCPPGRAGPRC
RDAAGRPCVVRGLEALDGSRWDDDCNSCRCRDGRVACSQLRCGPKPCSLHGKSQGSECPA
GQTCVAVRDERCFVKPCPGQGECWSPSHLAPPTARCHPESGCANVTFTFNKDVMAKGATV
EQVCRELRSLYVVEDLSSDSAVSLSCESSLSTGNEIHVAISTDDRRGGLTFVKEVTDRIM
DLVSKRSANSTIIGAIAEVRTQRRPSRIHNADYYLGPLLVSVATVIWVLAVTLMSLWCLR
RRRKQSAHTGVSPQAEDNNALHNSISAAACEQLNHIKNPIEKIPPNHHQQQHQLHGPHLY
QDKNSLNAKFRRSDAGSRLEEDEVDKRLQKARFPRAPPAYSLVDWEERPPDHTMGQPPPW
TNKQDNRQLQSQSRSRTEFMV
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggccctctcccggagccccgcccccctgcccctcctcctcgtgctgctgtccgcggcc
ctgcaggtctcttcggcgtcgggacactttgaacttcagattttgtcgatgcagaacgtc
aacgggcggctgcaatccggcgcctgctgcgacggcccccgggacgacggcccccgggac
gacaggggtcagtgggacgacggcccccgggacgacaggggtcagtgggacgacggcccc
cgggacgtcaggggtcagtgggacgacggcccccgggacgacaggggtcagcgggacgac
ggcccccgggacgacaggggtcagcggtgcgcggcggacgaatgtgacacctacttccgg
gtgtgcctgaaggagtaccagctgaaggtgtccacggccgggccctgcagcttcggcagc
gcctccacgccggtgctcggcgggaacagcttcacgttgcgcaacaccaagagcgacgac
ggggcccgggtcgtgttgccgttcagcttcgcgtggccgaggtcgtacacgctgatcgtc
gacgccttggacttcaacaacgactcgtcctccagcagcggcgcggccatcgagcgggcc
gtccactcggggatgatcaaccccggccggcagtggcaggcgctgaagcacgacggcccc
gtggctcagttccagctccggctgcgcctcggctgcgacgagcattacttcggcttcggc
tgcaacaagttctgtcggccgcgcgacgacttcttcggacactacgagtgcgaccacaac
ggcaacaagacgtgcctggagggctggtcgggtccggactgccacacggcgagctgccgt
cagggctgcagcgcccagcacggatcctgtaaagtccctggagagtgcaggtgtctgtat
ggctggcagggcgagtactgtgatcagtgcatccctcaccccggctgcgtccatggcagc
tgtgtggagccctggcagtgtctgtgtgacaccaactatggaggacagctgtgtgacaaa
gatctgaacacgtgtcggacgcggcagccatgtttgaacggaggaacctgcagcaacacg
ggacctgacaagtaccagtgctcgtgtcccgacggcttctccggagtcgactgtcagaga
gcggaccacgcctgcctgtccagcccgtgtctgaacgccggcagctgtgaggaaaccagt
cagggcttcgagtgtcgctgcgccgccggctggaccggagcctcctgctccatcaacgtg
gacgagtgtctggtgaacccctgcggtcacggcgggacgtgtcaggacctggtcaacggt
ttcaggtgcacctgtccgcctcagtggaccgggaggacctgcctcatcgatgccaacgag
tgcgaccacgacccctgcgtcaacgccaactcctgccgaaatctgattggcggatacttc
tgcgagtgcgtcccgggctggacgggccagaactgcgacaccaacgtcgacgactgtggc
gctcagtgtcagaacggagcgacgtgcaaggacctgctgagcgggtacacctgcgtgtgc
gccgcgggtttcggtggcgtccactgtgagcgggacgtggacgagtgcgccagcgggccg
tgcctcaacggcggtcgctgccatgacgaggtcaacggcttccactgcctgtgtccacct
ggttcctcaggacgtcgctgccagtcggacgtcgattactgccgccgcagtccgtgtcaa
aatggcggccagtgcttcaacctggcggccgactacgtctgcaaatgtcccgaagactac
gagggcaggaactgctcgcgcctgagggaccactgccgcacctcgccctgcaaagtgatt
gacagctgcacagtggcagtggcgtccaacagcacggcgagcggggtgcgtttgatttcg
tccaacgtgtgcggcccccacgggcggtgtcggggccacgccggcggacagttcagctgc
gagtgtgcggagggcttcacggggacgtactgccacgagaacattaatgactgtgagagc
gccccctgtctgaacggaggcacctgtatcgatggagtgcgtcagtatcagtgtgtctgt
gccgaaggctgggacggccccgcctgcctccacaacgtggacgactgtagctccgccccc
tgtctgaaccgcggcgtctgtcgagacctcgtcaacggtttctactgcgagtgcaacggt
ggctggaagggaaagacctgtcactcaagagagagtcagtgtgacgagtggacctgtcac
aacagaggaacctgcctcgacgaaggcgatgccttcaggtgtgtgtgtgctgtcggctgg
gagggacgcagctgtaacacggtgaagaacggcgtctgtctgcagagcccctgtgagaac
ggaggcacctgcgtggtgggcggagcctccttcagctgcgtctgcaaggagggctgggag
ggcgccacctgcagccacaatgccaacgactgtagttctcatccctgttataacggtggg
acctgtgtggacggagacaactggtaccgatgtgaatgttctccagggttctccggcccc
gactgcaggatcaacatcgacgagtgccagtcgtcgccctgcggcttcggctccacctgc
gtggacgagatcaacggttaccgctgcgtctgtcccccgggacgagccggtcctcgctgc
cgagacgcggcgggacgtccctgtgtggtcagaggactggaggctctggacgggagcagg
tgggacgacgactgtaacagctgccgctgccgcgacgggagagtcgcctgctcccagctt
cggtgtggaccgaaaccttgtagcctccacgggaagtctcaaggctccgagtgtcccgcc
ggtcagacctgcgtcgccgtgcgggacgaacgctgcttcgtcaagccctgccccggtcag
ggggagtgctggagcccctcccacctggccccgcccacagccaggtgtcacccagagagc
ggctgtgccaacgtcaccttcaccttcaacaaggacgtcatggcgaagggtgcgacggtg
gagcaggtttgccgcgagctcaggagcctctacgtggtcgaggacctgtcctctgactcc
gccgtctccctgagctgcgagtcgtcgctcagcaccggcaacgagatccacgtcgccatc
tcgacggacgaccggaggggaggtttgaccttcgtcaaggaggtcacagacaggatcatg
gatctggtgagcaagaggagcgccaacagcaccatcatcggcgccatcgccgaggtccgc
acccagagacgaccgagccgcatccacaacgcagactactacctggggcccctgctggtc
tccgtggcgaccgtcatctgggtgttggcggtcaccttgatgtcactgtggtgcttgagg
aggcggaggaagcagagcgcccacacaggggtcagcccccaggccgaggacaacaacgcc
ctccacaacagcatcagcgccgccgcctgcgagcagctcaaccacatcaagaacccgatc
gagaagattccaccaaaccaccaccagcagcagcaccagctccatggtccccacctctac
caggacaagaactccctgaacgccaagttcaggagatcagacgccgggagccggttggag
gaagacgaggtggacaagaggctgcagaaggcgaggttcccccgggcgccgccggcgtac
tcgctggtggactgggaggaacgcccccccgaccacacgatgggccagcccccgccctgg
accaacaaacaggacaacaggcagctgcagtcacagagtcggagcaggacggagttcatg
gtataa
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