Scophthalmus maximus (turbot): 118312821
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Entry
118312821 CDS
T09850
Name
(RefSeq) procollagen galactosyltransferase 1-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau00514
Other types of O-glycan biosynthesis
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118312821
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118312821
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118312821
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118312821
Glycosyltransferases [BR:
smau01003
]
O-Glycan biosynthesis
O-linked Gal type
118312821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
MT-A70
Motif
Other DBs
NCBI-GeneID:
118312821
NCBI-ProteinID:
XP_035493642
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All DBs
Position
8:16939392..16952602
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AA seq
609 aa
AA seq
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MPRVSSLLPALLFLVLPGLSRGYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLYLGAI
ERLRYPKERVALWVATDHNIDNTTAILRDWLIKVQNDYHYVEWRPDDESSAFEDEAGPKH
WNNPRYEHVMKLRQAALDTAREIWADYFLVADCDNLLTNQDVLWKLMTENNTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQERRGCFAVPMVHSTYLVDLRKEASRRLAFYP
PHPEYSWALDDVIVFAYSARMADVQMYVCNKETYGYLPVPMRSHASLQDEVESFLHTQLE
VMVKNPPLEHSSFLSLPPKQPNKMGFDEVFMINLVRRADRRERMLRTLYEQELSCKVVAA
VDGKALNKSDVESMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIADRGLQTSLVI
EDDLRFEVFFKHRLQTLLQEVTTHKLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYLLSLQGAQKLLRADPLRKMLPVDEFLPVMYDKHPVSEYMDHFERRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNEKVKTDWDRAKSRKTQEQEELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggttagctcgctgctgcccgcgctgctgttccttgtcctgccgggcctgagc
cggggatacttccccgaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcatcgcgctggtctgccgcaactcggcgcactccctgccgctgtacctcggtgccatc
gagcgcctccgctacccgaaggagcgcgttgcgctgtgggtggcgacagaccacaacata
gataacaccacagccatcctgagagattggctcatcaaggtgcagaatgactatcactat
gtggagtggagacctgacgatgaatccagtgcctttgaagacgaggcgggacctaagcac
tggaataatccccggtatgaacatgtgatgaagctccgtcaggcagcgctggacaccgcc
cgcgagatctgggccgactacttcctggtggctgactgtgacaacctgctcaccaatcag
gatgtgttgtggaaactgatgacggagaacaacaccattgtagctcccatgctggagtcc
agagcagcttactccaacttctggtgcggcatgacttcacagggttactacaagcgtaca
ccggcctacatgcctatacgtaagcaagagcgtcgtggctgtttcgctgtacccatggtc
cactctacctacctggtggacctacggaaagaggcctcccgtcggctggcattttatcca
cctcacccggagtacagctgggccctggatgatgtcatcgtctttgcctactcagctcgc
atggcagatgtgcagatgtatgtgtgcaacaaagagacgtatgggtatttgccggtgccg
atgcgctcccacgcatccttgcaggatgaggtggagagcttcttgcacacacagctcgag
gtcatggtgaaaaatcctccgttggagcactcaagtttcctgtctcttcctcccaagcag
cctaacaagatgggctttgatgaggtgttcatgataaatctggtgcggagagctgatcgt
cgtgagcgaatgctgagaactctgtacgagcaggagctcagctgtaaggttgttgctgct
gtggatggcaaagctctgaacaagtctgatgttgagtctatggggattaagatgcttcca
gggtacaaagacccttatcatggtagacctctcaccaagggtgaactgggttgtttcctc
tctcattacaacatctggaaggagatcgccgaccgtgggctgcagacatccctggtcatc
gaggacgacctccgcttcgaggttttcttcaaacatcgtctccagactctgctgcaggag
gtgacgacacacaagctggactgggatctcatttacatcggacggaagcgcatgcaggtg
gaccatccggagaagtctgtgcccaacatacacaatctggtggaggctgactactcctac
tggacactaggctacttgttgtcgttacaaggagctcagaagctcctcagggccgatcca
ctgagaaagatgcttcctgtcgacgagttcctccctgtcatgtacgacaaacatccagtt
tccgagtacatggaccactttgagcggcgggacctgcgtgccttctctgccgagcctctc
ctggtttacccgacccattacaccggagaccaaggctacatcagcgacacggaaacatcg
gtggtttgggacaacgaaaaggtcaaaaccgactgggaccgagccaagtcgaggaaaact
caggagcaggaggagctgagctttgaggcccagaactcggacgtactgcagtctgaactg
gagaactggagcgcgagggacgagctgtga
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