Scophthalmus maximus (turbot): 118312856
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Entry
118312856 CDS
T09850
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118312856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118312856
03016 Transfer RNA biogenesis [BR:
smau03016
]
118312856
03012 Translation factors [BR:
smau03012
]
118312856
04131 Membrane trafficking [BR:
smau04131
]
118312856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118312856
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118312856
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118312856
Translation factors [BR:
smau03012
]
Eukaryotic type
Elongation factors
118312856
Membrane trafficking [BR:
smau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118312856
Exosome [BR:
smau04147
]
Exosomal proteins
Proteins found in most exosomes
118312856
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
118312856
NCBI-ProteinID:
XP_035493744
LinkDB
All DBs
Position
8:20349548..20356783
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKLHISIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMSSWFKGWKINRKDGNASGTTLLEALDAIQPPS
RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGIVVTFAPVNVTTEVKSVEMHHEAL
TEALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAGSFTAQVIILDHPGQISAGYAP
VLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMIPGKPMCVESFSEYP
PLGRFAVRDMRQTVAVGVIKAVEKKAPSSGKVTKSAQKAQKTK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacataagcattgttgtgataggacatgtcgactccggcaag
tccaccaccaccggccacctcatctacaagtgtgggggcattgacaagagaacgattgag
aagtttgagaaggaagctgctgagatgggaaagggttccttcaaatatgcctgggtcctg
gacaagctgaaggcagagcgcgagcggggcatcaccattgacatctcgctttggaagttc
gagaccggcaagtactacgtcaccatcatcgatgctccaggacacagggacttcatcaag
aacatgatcactgggacttctcaggcggactgcgccgtgctgattgtggccgcgggcgtg
ggcgagtttgaagccggcatctcgaagaacgggcagacgcgtgaacacgccctgctggcc
tacaccctgggagtgaagcagctcatcgtgggcatcaacaaaatggattccaccgagccc
aactacagccagaaacgctacgaggagatcgtgaaggaagtcagcacttacatcaaaaag
attggctacaaccccgacactgtggcctttgtgcccatctctgggtggaacggagacaac
atgctggaacccagcccaaatatgtcctcctggttcaagggctggaagatcaaccgtaaa
gacggtaacgcttcgggcaccacgctgctggaggctctggacgccatccagcctcccagc
cgccccaccgacaagcccctccgcctgcccctgcaggatgtctacaagattggaggcatc
ggtactgtaccggtgggccgagtagagaccggcatcctaaaacctggcattgtggtgacc
tttgctcccgtcaacgtgaccaccgaggtcaagtctgtggagatgcatcacgaagccctg
actgaggcgctgcccggtgacaatgtaggcttcaacgtcaagaatgtgtctgtcaaggac
atccgccgtgggaacgtggctggagacagccgaaacgacccgccacaggaggcgggcagc
ttcaccgctcaggtgattatcctcgatcaccctggtcagatcagtgccggctacgccccc
gtgctggactgccacactgcacacatcgcatgcaagttcgccgagctcaaggaaaagatt
gaccgccgctcaggtaagaagctcgaggacaaccccaaggccctgaagtctggagatgct
gccatcgtggacatgatccccggcaagcccatgtgtgtggagagcttctccgagtacccg
ccactggggaggtttgctgtccgggacatgcgtcagacggtggcggtgggagtgatcaag
gctgtggagaagaaagccccctccagcggtaaggtcaccaagtctgcacagaaggcacag
aagaccaaatga
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