Scophthalmus maximus (turbot): 118312897
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Entry
118312897 CDS
T09850
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118312897 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118312897 (nup133)
03036 Chromosome and associated proteins [BR:
smau03036
]
118312897 (nup133)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118312897 (nup133)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118312897 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
YBR230W-A
Motif
Other DBs
NCBI-GeneID:
118312897
NCBI-ProteinID:
XP_035493847
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All DBs
Position
8:1271008..1284010
Genome browser
AA seq
1187 aa
AA seq
DB search
MMMTSFSRDGTARYLEKKRTEAAENSSCRFDSHTVVDSLSAVPPGGMFSPRTATPSSGRR
QQGRTGGRKSVSAAAGGSLLFSPRRTPLSVRSTPTRVQNHAAADSINYHVQNFGSSLPVK
VMEALTMADADDQISVKVNESGWAWMVCGDRLIIWKICQTAVAKMSVCKELQLPASEYVY
VADLVAVTSAAPLETATVQSISVLAVATEGTARFWPSLAQEGNYTETDVDLGDFCNFVVA
VRGGSFVLSSVKSRLLRANADSLGKLQCRALLQGQGMLSGIGRRVSSLFGILSPPANDTL
HSLLWAGGAGCLYTLTSSSLSKWEMDDSWEHQVLSWDARRALTESIADAIWGSESNYEEM
KEGANVVYLDMKLSQTGLVVLAAAWHPSDTPCLAYFCLVTLQDNGAAISDHFTVEVTKYN
PPFQSEDALQATRLLLPPSPGSTAYLYNEELVFACSTGTSRAALPDEKINFSSPGDGVRG
GGCCTNLPVFFCQNSGLLAVVARESVSILPETMEDSLCSSLAAAPEVSAMETPTRADPVA
QEDKTKLLKAAFLQFCRNDLVGAQTVTDELFPADGDGEEGAELDGVVIQIDLDLVDDYPA
SDPRWAESVPDESVGFPLTSLIILHQLEDKMKAHGCFMDFLLQVGLLERLGQVTVRSAPM
STRLLLCEHAEKLQAAMVLKNHHTKHAELVNRAIGTALQRNNAAVPPSLTAADVFFREVS
QISLVFDCLLEEEERSLKESPVDSVQWAEVVLTVNSIIKDMLQAAGQYRETKASVYRAPE
NAAAEPEYIPWTASGGVGGVRTVISRQHEIILRSVYPQADSALRGALCEQLVALLDIYLG
GCVAQLTSLQQQQRPPGTQQERYNSLEMEYGHRRSELLQPLLELGQYQWVAALAEKYCDF
DILVQMCEQTDNQSRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLSQPAAQHQQLASFL
QAHQHLSWLHHIHVHDYHSAHRTLYSQANAETRYFVKKKTLLALSKLTALASDLPEDELN
KQVDDIVEQERFLLHQETLPRQLLEEKQQNPDTMPLLSAHNLIQLYICDDNRGANEYDYK
KALDLLEYIDQEDDVDIDSLKCEIFGKALRRDDWSAADGNDDPLEAAKDSVFVKILLKLT
QEGVPLQTYLPDVRELLDSDDLSSFKTKPYFEFVLRANYEHYLQVQM
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacgtctttttcacgcgacggcaccgcgcgttatttggagaagaagaggact
gaggcggcggagaactcgtcgtgtcggttcgattcccacacggtcgtcgactcgttgagt
gcagtacctccgggcgggatgttcagcccccgcaccgccaccccgagctccggccgccgg
cagcagggccggactggcgggaggaagagcgtgtccgccgcggccggcggcagcctgctg
ttctccccgcggaggacgcctctgtcagtgaggtcgacgcccacccgagtgcagaaccac
gcggcggcagactcaatcaactatcatgtccagaacttcggctcctcgctgcccgtcaag
gtgatggaggcgctgacgatggctgacgctgacgaccagatctcggtgaaggtgaacgag
agcggctgggcctggatggtttgtggcgacagactaatcatctggaagatctgtcagacg
gccgtggccaagatgtcggtgtgcaaagagctgcagctgcccgccagcgagtacgtctac
gtggccgatctcgttgccgtgacgtccgccgcccccctggagacggccaccgtccagtcc
atctccgtcctggcagtggccacggagggaacggctcgtttctggcccagcctggcgcag
gagggcaactacacggagacggacgtggacctgggagatttctgcaactttgtcgttgcc
gtcagaggtggaagcttcgtcttgtcgtcggtgaagagtcggctgttgagagcgaacgca
gattcgttggggaagctgcagtgccgcgctctgctgcagggtcagggcatgttgtctggc
atcggacgccgcgtctccagcctgtttggaatcctctcgccgccggcaaacgacacactg
cacagtctgctgtgggcgggcggagccggctgcctgtacacgctgaccagctccagtctg
agcaagtgggagatggacgacagctgggagcaccaggtcctcagctgggacgcccgcaga
gctctgaccgagagcatcgccgacgccatctgggggtcagagagcaactacgaggagatg
aaggagggagccaacgtggtctatctggacatgaagctcagccagaccggcttggtggtt
ctggccgcagcctggcacccgtcagacactccctgcctggcctacttctgcctggtgacc
ctgcaggacaacggagccgccatctccgaccatttcaccgtggaggtcactaaatacaac
cctcccttccagagcgaggacgccctgcaggccactcgtctgttgttgcctccatcgcct
ggctccaccgcctacctctacaatgaggagctggtgttcgcctgctcgacggggaccagt
agggcagcgctccctgacgagaaaatcaacttcagctccccgggtgacggtgtccgtggt
ggaggctgctgcaccaacctgccggtgtttttctgccagaacagcggcctgttggcggtg
gtggcccgggagagcgtctccatcctgccagagaccatggaggactcgctgtgctcctcg
ctggccgcggccccggaggtttcagccatggagactccgaccagagcagatccggtcgcg
caggaggacaaaaccaaactcctgaaggcggccttcctgcagttctgtcgtaatgacctg
gtgggggcccagacagtcacagacgagctcttccccgccgacggcgatggagaggagggg
gcggagctggatggcgtggtcattcagatcgacctggacctggtggacgattacccggcg
tccgaccctcgctgggccgaatccgtcccagacgagagcgtcggcttccctctcacgtcc
ctcatcatcctgcaccagctggaggacaagatgaaggcccacggctgcttcatggacttc
ctgctccaggtgggtctgctggagcggctcggccaggtgacggtgcgctcggctcccatg
tcgacgcgcctgctgctgtgcgagcacgccgagaagctgcaggcggccatggtgctgaag
aaccaccacaccaaacacgccgagctggtcaaccgggccattggcaccgcgctgcagagg
aacaacgccgccgtgccgccgagcctcaccgccgcagacgtcttcttccgagaggtgtcg
cagatctccttggtgtttgactgtctgctggaggaggaggagcggagtctgaaggagagc
ccggtggactcggtgcagtgggccgaggtggtgctcaccgtcaacagcatcatcaaggac
atgcttcaggctgctggtcagtacagagagaccaaggcctccgtgtacagagcccctgag
aacgctgctgcggagcccgagtacatcccgtggacagcgtcaggcggcgtgggcggcgtt
cgcaccgtcatctcccgccagcacgagatcatcctgcgctcggtgtacccgcaggccgac
tcggcgctccgcggcgccctgtgtgagcagctggtggcgctgttggacatctacttgggc
ggctgtgtggcccagctgacctccctgcagcagcagcagaggcccccagggacccagcag
gagcgctacaacagcctggagatggagtacggccaccggcgctccgagctgctgcagccg
ctgttggagctgggtcagtaccagtgggtggcagcgctggcagagaaatactgcgacttt
gacatcctggtgcagatgtgcgagcagaccgacaaccagagccgcctgcagcactacatg
gccaagttcgccgaccagaactttgcagacttcctgttccggtggtacatggagaagggg
aagagggggaagctgctgtcccagcccgccgcccagcaccagcagctggccagcttcctg
caggcccaccagcacctgagctggctgcaccacatccacgtgcacgactaccacagcgcc
catcggacgctctacagccaggccaacgccgagacacgctactttgtgaagaagaagacg
ctgctggctctcagcaagctgacggcgctggcctccgacctgccggaggacgagctcaac
aaacaagtcgacgacatcgtggagcaggagcgattcctgctgcatcaggagacgctgcct
cgacagctgctggaggagaagcagcagaaccccgacaccatgcctctgctcagcgcccac
aacctcatccagttgtacatctgcgacgacaacagaggagccaacgagtacgactacaag
aaggctctggatctgctggagtacatcgaccaggaggacgacgtggacatcgactcgctg
aagtgtgaaatcttcggcaaggcgctcagacgggacgactggtccgctgccgacggcaac
gacgaccctctggaagccgccaaggacagcgtcttcgtcaagatcctcctgaagctcaca
caggaaggcgttcccctgcagacgtacctgcccgacgtcagagagctgctggactccgac
gacctgagcagcttcaagacaaaaccctactttgagtttgtgcttcgagccaattacgaa
cattacctgcaagtgcagatgtga
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