Scophthalmus maximus (turbot): 118312960
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Entry
118312960 CDS
T09850
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118312960
Membrane trafficking [BR:
smau04131
]
Protein recycling
Others
Others
118312960
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
118312960
NCBI-ProteinID:
XP_035493958
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Position
8:19474817..19621513
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AA seq
1255 aa
AA seq
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MGTGFLFCPKWHGALWVSLLMMFCLFHAAKAEITCRSCQPGHKWRAQELLLKFDRSESSA
GSTGEVSGRGDGAWGARAASGESRRLRCAAAGSSECAPDRADYAEPRLKRNTRDLRANGG
IDESGYAKIKVSYANVGGQQRASDGASPPAAAAARRKARTGRNSAGDGRVGSPGAAPSRD
PGEGSSSAAARRVARSEMRWSREERRAGGPRQEEPKLNSSTFALTGDSSHNQAMVHWSGQ
NSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKI
MLLTDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFG
RRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFP
GYIDPNSLVVQDEYVFVQVSTAGKPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRV
VAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANK
KMDNQVKTHITYNRGRDWRLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNIDS
RESSPGIIVASGSFGSELTASNVSVYITSDAGNAWRQVFDEEYAVLYLDQGGALVAIRHT
PLPIRHLWLSFDEGRQWSKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKI
DYRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRRLKATSRCVMGKTYSVSMTSGPCE
CAEADFECDYGYERRTNGKCSPAFWFHPSAMSRSCTTGMTFLNSTGYRKVVSNNCTAGVS
VEYTARRQQCPVLAPKGLHLVTSEGTLTATLGANVTFLVFLEEGDGARTSITLDFGDGHA
LTYSNVSSIEEGIKHIYRAVGIYRATATGENSLGSETTVLYLHVTCQLEYIHLSAPFVAV
RNKEVNLTAVLWPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGINTVTVQVSAGNT
ILQDRKAIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKNSLIQATGVREDQLLV
TVLPGLPTAAEFFLLPDKLLTEGKPEKTSAHLDQLSEVLLGALNQNLVQFTLRPGVQVTV
YAAHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGINVYAQMQNEKEQ
EMMSPANPTEATPGSQRDLVHSLETLDTELNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggggacggggttcttgttttgcccaaagtggcacggtgcgctttgggtttcgcttctg
atgatgttctgcctttttcacgccgccaaagcagagataacttgcaggtcgtgccagcct
ggacataagtggcgcgcgcaggaattactgttgaaatttgacagaagtgaatcctcggcg
gggtcgacgggagaagtttctggacgcggggacggcgcatggggagcccgggctgcgagc
ggcgaaagtcggcggctccgttgcgcggctgccgggtcctctgagtgcgccccggatcgg
gcggattacgcggagccgaggctgaaacggaatacacgcgacctgcgcgcaaacggcggc
atcgacgagagcggctacgcgaagattaaagtttcatacgccaacgtgggcggtcagcag
agggccagcgacggtgccagtccccccgccgccgccgccgcccgacgcaaagcgcgcacc
gggaggaacagcgctggtgatggacgcgtcggatcccccggtgcagccccgagtcgggac
ccgggggagggctccagctcggcggctgcacgcagagtggcgcgctcggaaatgcgctgg
agccgagaggagcggagagccggcggtccgaggcaggaggagccaaaacttaatagttct
acgttcgccttgaccggggactcgtctcacaaccaggccatggtgcactggtccggccag
aacagcagtgtgatcttgatgctgaccaaactatttgacttcaacctcaacagcgtgact
gagagttcattatggaggtcaaccgactacggagcaacgtaccagaagctgaacgacaaa
gtcggagcaaagacgatactcagttacttgtatgtgagcccaaacaacaagaggaagatc
atgctgctcaccgatccggaggtggagagcagtctactgatcagctccgacgaaggagca
acctaccagaagtaccggctcaacttctacatcctcagcctgctcttccatcccgagcag
gaggactggattctggcctacagccacgaccaaaagctctacagctccgtggagtttgga
aggaggtggcagctggtgcacgagagagtggcccccaatcgtttctactggtcgaaaatg
ggtttggacaaagagccgggcctgattcacctggaaaccagcatctctgaaggacaggcg
ctgtacgtcacctgcaagctgcagaactgcaccgacgccaacaagggcaaaccgttcccc
ggctacattgaccccaattctctggtggtgcaagatgagtatgtgtttgtccaggtatcc
accgcgggaaagccgatctactacgtgtctgctaaaagagacgtcttcactccgatgaag
ctgcccaagtacaccctgcctaaggacctgcacgtgatcagcacggacgagaaccgcgtg
gtggcagccgtccaggagtggaaccagaacgaaacctacaacctgtacgtgtccgacacc
tctggggtctactacaccctggctctggagaatgtcgtcagcagcatgggccccgagggc
aacgtcatggtcgatctctacgaggtagcgggaataaaagggatgttcctcgccaacaag
aagatggataaccaagtgaagacgcacatcacctacaacagaggcagagactggcggctg
ctgcaggccccgagcaaagacctaaggggcaacagcatccactgtgtgctaccgtactgt
tcgctacatctccatctccacgtgtcggccaatccctacacatctggaaacatagacagc
agggagtcgtcgccggggatcattgtcgcgtcaggctcgttcggctcagagctgaccgcc
agcaacgtcagcgtgtacatcacctcggacgcggggaacgcatggcgacaggtcttcgac
gaggagtacgcggtgctctatctcgaccagggaggcgccttggtcgcaatacgacacact
ccgcttcccatccgacacctatggttgagcttcgacgaaggacggcagtggagcaagtac
agcttcaccaacacgcccctgttcgtggacggggtgctgggggaacccggggaagagact
ctcatcatgacgatattcggtcacgtcagtcatcgctccgagtggcagctggtgaaaatc
gactacaggtccatcttcaacaggcggtgcacggaggcggactatcagacgtggcacctg
cacaaccagggtgagccgtgcctcatgggggtgaagaggatctaccggagactgaaggcc
acgtccaggtgcgtcatggggaagacgtactccgtgtcgatgacgtcgggcccctgtgaa
tgcgccgaggccgactttgagtgtgattatggctacgagagacggaccaatggaaagtgc
agccccgccttttggttccatccatcagcgatgtccaggagctgcaccacggggatgact
ttcctcaacagcactggctacaggaaagtggtctccaataactgcacagctggggtcagt
gtggagtacactgccaggaggcagcagtgtcccgtcctagcacccaaaggtctccacctg
gtcaccagcgagggcacgctgacagccacgttaggcgccaatgtcaccttcctggttttt
ctggaagagggcgacggggcgaggacaagcatcactctggacttcggagacggccacgct
ctgacatactccaacgtgagctccatcgaggagggcatcaaacacatctacagagccgtg
gggatctaccgggcgacggctaccggggagaacagcctcggttcagagaccaccgtgctg
tacctgcatgtgacatgtcagctggagtatatccatctctcggctccctttgtggcggtg
aggaataaggaagtgaacctgaccgctgttctgtggcccagccaagtgggaacggtcacc
tacatctggtggatcggaaataacacggagccagttatcaccctagagggaagtgtagca
tgcacgttctcccgggaaggcatcaacacagtcaccgtgcaggtgtccgcggggaacact
attctgcaggacagaaaagccatcgccgtccacgagtatttccgatctcatctgctcgcc
ttttcatcaaacctcgacgaccacaaccccgatgtcgccgaatggaggctggacgtgagc
cgagtcatcaagaactctctgatccaggctacaggcgtgagagaggatcagctactggtc
accgtcctgccaggtttgcccaccgcggcagagtttttcctcctgcctgacaaactgcta
accgaggggaagccagagaagacctctgctcatttagatcagctctctgaggttttgctg
ggcgccttgaatcagaaccttgtccagttcacattgcggccaggggtccaagtcaccgtg
tatgcagcacacctatcagcagcgcccctagtggacaccagcgagaaccacagtggctct
gccatgctcatgctgctctcggtggtggttgtgggcttagccgtctttgtcatctataaa
ttcaagaggaagatcccaggcatcaacgtctatgcgcagatgcagaatgaaaaagagcaa
gaaatgatgagtccagcgaatccaacagaggcaacgcccggctcacagcgggacttggtg
cattctttggagactctggacaccgagttgaactcacggcccatcggatgtatgaaacct
catgtacatgtgaaattctccacagagctccccacgtacatcgtgtga
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