Scophthalmus maximus (turbot): 118312986
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Entry
118312986 CDS
T09850
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118312986 (tmc5)
03037 Cilium and associated proteins [BR:
smau03037
]
118312986 (tmc5)
Transporters [BR:
smau02000
]
Other transporters
Pores ion channels [TC:
1
]
118312986 (tmc5)
Cilium and associated proteins [BR:
smau03037
]
Other cilia and associated proteins
Stereociliary proteins
118312986 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
118312986
NCBI-ProteinID:
XP_035494003
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All DBs
Position
8:complement(18557883..18568829)
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AA seq
998 aa
AA seq
DB search
MTSYSNGGFFNAAYHDSDTLEVDRRYSSKSNHTNPYAREDPTWRGDRAETHNRSAGQTTG
GDDAMARVPWRGWQGESWRGIESIPMGLISTRPGSPSWRHDLNHSTFQINPDPQYDRSPA
VRLPPSMSGNTTMRWRGVTMRRMSMFPGSDPSNLAFTEDAIRHEMENEEQNLVKKLVALS
TRERIRDIRDLPMSCEEKKHIRSQVLAFKSAKQSRQFTCFTDCSENVSLFFRRCGYSIRS
VRQTLELWQGIMKEIGGKFGTSVLSYFLFLKWLLMFNIFSFLVNFGFITIPLLVYDPLPS
IPPNVSFRGLEILTGAGYFNYTVMYYGSYSNETLVGLVEYNMQLAYFFTIAVYMVLCGIA
LILSMASSFKTNYVLAAPASSGAWQLLCSWDFNITNERAVRQRKNNLRVQLKESLSEKAQ
RELLTLSEKLKHFGVYLGCWLLSTGLAVGCGASIYYLCQYEQQRAGDAAGRSLLREAETL
LVPFVVSLMNLVVPLFYSLFYKFEHYSSQRRQIYALVVRNVLLRMSILAVLCYYWMNVVA
RTHSCWESVVGQALYRLVIFDFLFLMLGSFFGEFLSKVIGTTLLPSLGVPEFDIARNVLE
LIYAQTLAWIGIYFSPLLPAIQIVKFFILFYLKKVSLTQNCQPPRRTGRAAQMQTTFIAL
LFFPFFVGALSMVAYTAWRLTPSEQCGPFRGLNNTFSVVGVWMDDLEEIPGSQWVVWIYQ
NVIRSEIFYFLITLIILVIIYMFWQVTKGRKELICLLKQQIVNEGKDKSFLLDKLQNLQK
SQPNKPKLKNQKRHTGRRSGDHPSGGQSGSNAMFQALLARQQQEEEERRTDGGVPVPSDI
STSSALMQAMLARQRADGQVEDLYQMPDKHPSPSGALAQAMHSRQRAEGQERDEYYATAG
FSENPVSGPSAVMQAMQARQRAEGDTADDRDDPTSSVSSVMMQVMQARQRAEEEEEEEGD
RPQWAPAHPQNPVPPGTSALIQAMLARQQAQNEYDDGY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaacggcggatttttcaacgctgcttaccatgacagcgacactctc
gaagttgacaggaggtattccagcaaaagcaaccacaccaacccctatgccagggaagac
ccgacctggcgcggtgaccgggcagagacgcacaacaggtccgccggtcagacgaccggc
ggtgatgatgctatggcgagagtgccctggaggggctggcagggggagagctggaggggg
atagagagcatccccatgggcctcatctcgacgcgccctggaagcccttcatggcggcat
gacctcaatcacagcacatttcaaatcaaccctgaccctcagtatgatcgatccccagca
gtccgacttcctccgtcaatgtcaggtaacacgacgatgagatggaggggagtcacaatg
agaaggatgagcatgttcccaggcagtgatccttccaatctagcgttcacagaggatgcc
atcaggcacgagatggagaacgaggaacagaacctggtcaagaaactcgtcgccctgtca
acacgagagcgaatacgggatattcgggatcttccaatgagctgtgaggaaaagaaacat
atcaggagccaagtactggcgttcaagtccgccaagcaatctcgccagttcacatgtttc
accgattgctctgaaaatgtgtcgctgtttttccgcaggtgcggctacagcatcaggtcg
gtcaggcagaccctggaactgtggcagggcatcatgaaggagattggtggcaaatttggc
accagtgtgctgtcctatttcctgttcctcaagtggctgctcatgttcaacattttctcc
ttcctggtcaacttcggcttcatcaccatcccgctgctcgtttacgaccccttacccagc
atacctccaaatgtgagcttcaggggcctggagatactgactggagctggttacttcaac
tacactgtcatgtactatgggagctacagcaacgagacgctcgtgggtctggtggagtac
aacatgcagctggcctatttcttcacgattgcagtctacatggtgctgtgtggaattgca
ctcattttaagcatggcaagctcatttaagacaaactatgtactagcagcgccggcttcg
agcggcgcatggcagcttttgtgcagctgggattttaatataaccaatgagagagcagtg
cggcagcgcaagaacaacctccgcgtccagctcaaggagtctttgtcagagaaggcccag
agggagctgctaaccctctctgaaaaactgaagcactttggggtttatctgggttgctgg
ctcctctccactggcttagctgttggctgtggagccagcatctactatctctgccaatat
gaacagcagagagcaggcgatgctgccggccggtctctgcttcgggaggcagagactctc
ctggttcccttcgtggtgtcactgatgaacctggttgtcccactcttctactccctcttc
tacaagtttgagcactactccagccagcggcgacagatctacgcactcgtagtcaggaac
gtcttactcagaatgtctattctggctgtcttgtgttattactggatgaacgtggtggcc
aggacgcattcgtgttgggagtccgtggtgggacaggctttgtaccgtctggtcattttc
gacttcctctttctgatgctgggatccttctttggagagttccttagcaaggtaattggg
accacattactaccgagtctgggggttccagagttcgacattgccagaaatgtgcttgaa
ctcatctatgcacagactctggcctggattggaatctacttctctcccctgctgcctgcc
atccagattgtcaaatttttcatcttgttttacctgaagaaggtcagcctgacccagaac
tgccagccgccgcggcgaaccggcagggcggctcagatgcaaacaaccttcatcgccctc
ctcttcttccccttcttcgtgggagccttgtccatggttgcatacactgcctggagactg
actccctcagagcagtgtggtcctttccggggactcaacaacaccttcagtgtggtcgga
gtctggatggacgacctggaggagatccctggttctcagtgggtcgtctggatctaccaa
aatgtcatcaggagtgaaatcttctacttcctcatcacactcatcatcctggtcatcata
tacatgttctggcaagtcaccaagggccgcaaggagcttatttgtctactgaaacagcag
attgttaatgaggggaaagacaagtccttcttgctggacaagctccagaacctccagaag
tctcagcctaacaaacccaagctgaagaatcaaaaaaggcacaccggacgacgttcaggt
gaccacccctcaggcggtcagtccggctcaaatgccatgtttcaggctttgctcgctcgc
cagcagcaggaggaagaagagagacggaccgacggtggagttccggttccctccgacatc
tccacctccagcgccctgatgcaggccatgttggcccgtcagagagccgacggccaggtg
gaagatttgtaccagatgcctgataaacacccgtcaccctccggtgcgctcgcacaggcc
atgcacagcaggcagagggcagagggtcaagagagggatgaatactacgccacagcaggc
ttttcagaaaaccctgtcagcggacccagcgccgtcatgcaggcgatgcaagccaggcag
agagcggagggagacacggcagacgatagggatgacccaacatcctccgtgtcgagtgtt
atgatgcaagtcatgcaagccaggcagagagcggaggaggaggaggaggaggagggggac
aggcctcagtgggcccctgctcacccacaaaacccagttcccccaggcaccagtgctctc
atccaggccatgttggcccggcaacaggcccagaacgagtacgatgatggttactga
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