Scophthalmus maximus (turbot): 118312988
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Entry
118312988 CDS
T09850
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smau00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
smau01100
Metabolic pathways
Module
smau_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118312988 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118312988 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118312988 (xylt1)
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
118312988 (xylt1)
Glycosyltransferases [BR:
smau01003
]
O-Glycan biosynthesis
Glycosaminoglycan
118312988 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
118312988
NCBI-ProteinID:
XP_035494005
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All DBs
Position
8:18602281..18740448
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AA seq
943 aa
AA seq
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MVGGVCARRLARRSRSALIAALTVLLVQTLVVWNFSSLDSGEDGGSSVREKRDRVAGNKA
AGGDHLLRGVRQRQHLPPPGRGASRHIQQPDGYYSHRPKEKSRVDSNNENSVPRDFENID
NSNFGARSQPHRQSVGATSSKQQREHLQEKAHTQQQAWRDNSPNLGRSSNEVLPVGHQPL
AVGNNSSHPGGQGIAGVPRQQYRASQAQQAPSQHRHQHPHRRQATAAPLEVTYDQPPECE
ISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCHLEGKANVNVQWDEDSA
ESFPLKPVRIAFVLVVHGRASRQFQRLFKAIYHASHYYYVHVDQRSNYLHRQVQALATQY
PNVRVTPWRMSTIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRTNNQLVAF
LSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPDDISVDGGSDWFLL
NRLFVEYVINSKDDLVSSMKRFYAYTLLPAESFFHTVLENSAYCESMVDNNLRITNWNRK
LGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDTYLFG
SFPQGMPALNSYWENVYDEPDGVASLSDTQLTYHHSFSRLGLARAAASLQGNPKDHSCRY
FPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETMETWVAPKKNFKLTTNPASTFSR
LQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQKWSKGPNITVTVVWIDPTNVIAATYD
ILIDASAEFTHYRPPLNQPLRPGVWSVRILHHWSPVAEMKFLIAPLSHHKHQPIRQEETV
KLHNGPAKNSYMEQSFHGLNPVLNIPVSLGYVEQAKRNAALTGPELERWLDGLVGELWEA
ADVCAVGPTACPVMQACSKNPWSSLSPDPKSQLGAPRADGRIR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggcgtgtgcgctcgcaggctggcccgccgctcgcggtccgccctgatcgca
gccctcacggtgctgctggtgcagacgctggtcgtgtggaacttcagcagcctcgactcc
ggcgaggacggcggctccagcgtgcgggagaagcgggaccgggtcgcgggcaacaaagcc
gccggcggcgaccatctcctgcgcggcgtccggcagcggcagcatctccccccgcccggg
agaggggcgtctcgacacatccagcagccggatggatactactcccaccggccaaaggag
aaaagtcgagtcgacagcaacaacgagaactctgtgcccagagactttgagaacatagac
aatagtaactttggcgcgcgctcgcagccacaccggcagtctgtaggcgccacgagcagc
aagcagcagcgggagcatctgcaggagaaagcccacacgcagcagcaggcctggcgggac
aactcccccaatctgggccgcagctcaaatgaagtgctgcccgtaggccaccagccactg
gcggtcggcaacaattcctcccacccgggtggtcagggaatcgcgggagttccgcggcag
cagtaccgcgcctcacaggcccagcaggccccatcccagcacagacatcaacacccccac
aggaggcaggcgactgcggcgccgctggaggtgacctacgaccagccgcccgagtgcgag
atcagcgggaaggaggccatctcagctctctccagagccaagagcaaggagtgtcggcag
cagatcgccgaggtgtactgcagacacaaggaagggcagttaatgcctgagaaggtcact
cgctactgccaccttgagggtaaagccaatgtgaacgtccagtgggacgaggactctgcc
gagagctttccactcaaaccagtgaggatagcgttcgtcctggtggtgcacggacgcgcc
tctcgccagtttcagcgcctcttcaaagccatctaccacgcgtcgcactactactacgta
cacgtcgatcagcgctccaactacctgcataggcaggttcaggccttggctactcagtat
cccaatgtgagggtgacgccctggcgcatgtccaccatctggggtggcgccagcctgctg
accatgtacctccgcagcatggccgacctgctggccatgagggactggagctgggatttc
ttcatcaacctcagtgctgctgactaccccatcagaaccaataaccagctggtggccttc
ctgtccaaatacagagacatgaacttcatcaagtcccatggcagggacaatgccaggttt
atccgcaaacagggtctggatcgtctgttcttcgagtgcgacacacacatgtggaggctg
ggtgatcgtaaaatcccagacgacatctcagtggacggcggatccgactggttccttctc
aatcgcttgttcgtggaatatgtcatcaactccaaggacgacctggtctccagcatgaag
cgattctacgcctacactctgctgcctgccgagtcgtttttccacacagtgctggagaac
agcgcctattgtgaaagcatggtggataataacctgcgcatcaccaactggaatcgcaaa
ctgggttgtaagtgccagtacaagcacatcgtggactggtgtggatgctcccctaatgat
ttcaagccggcagacttccaccgcttccagcaaaccgtgcgacccaccttctttgccagg
aagttcgaagccagcgtgaaccaggagatagtgaaccagctggacacctacctgtttgga
tcgtttccgcagggaatgccggcgctgaactcctactgggagaacgtgtacgacgagcca
gatggcgtggccagcctgtcggacacgcagctcacgtaccaccactccttctcacgcctg
ggcctggccagggccgccgcctcgctgcaggggaacccaaaggatcacagctgcaggtac
ttcccgatgggccacccggtgtcggtgcatctctacttccagtcggaccagttccagggc
tacctggtcaagcaccatgccaccaatctggccaccagcaagctggagaccatggagacc
tgggtggcacccaagaagaacttcaagctgaccaccaatccagccagcacattcagccgg
ttgcagtttgcagagatcggcacagagtgggacgccaaagagcgtatgttcagaaacttc
ggcggcctaatggggcccatggacgagacagtgggcatgcagaagtggagcaaggggccc
aacatcaccgtcaccgtcgtgtggatcgatcccaccaacgtcatcgcggccacctatgac
attctgatcgacgccagcgccgagttcacccactaccgccccccgctgaaccagcctctg
cgacccggcgtgtggagcgtccgcatcctgcaccactggagccccgtggccgagatgaaa
ttcctcattgccccgctgtcccatcacaaacaccagcccatacggcaagaggagaccgtg
aagcttcacaacgggccggcgaagaacagctacatggagcagagtttccacggcctcaac
ccggtgctcaacatccccgtcagcctgggctacgtggagcaggccaagaggaacgcggca
ctgaccgggccggagctcgagcgctggctagacggcctggtgggcgagctgtgggaggcg
gccgacgtgtgcgccgtgggccccaccgcctgtcctgtcatgcaggcctgctccaagaac
ccgtggagctccctcagcccagaccccaaatcccagctaggagcgccgcgggcagacggg
cgcatcaggtag
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