Scophthalmus maximus (turbot): 118313113
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Entry
118313113 CDS
T09850
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04110
Cell cycle
smau04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118313113 (smc3)
04114 Oocyte meiosis
118313113 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118313113 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smau00535
]
118313113 (smc3)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118313113 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
118313113 (smc3)
Proteoglycans [BR:
smau00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
118313113 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118313113
NCBI-ProteinID:
XP_035494273
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All DBs
Position
8:complement(16408849..16432000)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSTERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLSRSEDLDTLVDKTEGEIKDHIKS
MDRWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtcatcatccaggggttccgaagttacagggaccagactgtggta
gacccgttcagtccgaagcacaatgtcatcgtcggaaggaacgggtcgggaaaaagtaac
tttttctacgccattcagtttgtgctcagtgatgagttcagccacctgcggcctgagcag
cgtctggccctgctccatgagggaactggtccacgtgtcatttctgcttttgtggagatt
atatttgacaactctgacaaccggttgccgattgacaaagaggaagtctcccttcgccgc
gtcattggcgccaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgcgggcttctcccgcagtaacccctactacatcgtcaag
cagggaaagatcaaccaaatggccacagcacctgactcccagcgtcttaagctgcttcga
gaggtggcagggacacgtgtttatgatgagcgcaaggaggagagtatttctctcatgaag
gagaccgaggggaaacgagagaagatcaatgagttgctgaagtacattgaggagcgtctg
cacaccttggaggacgagaaggaggagctggctcagtaccagaaatgggacaagatgaga
agagccctggagtacaccatctacaaccaggagctgaacgaaacccgcgccaagctggac
gagttgtcttctaagagggagacctgtggtgacaaatccagacagctgcgtgatgctcag
caagatgccagagacaaagtagaggagacggagcgtgttgtgcgggagctgaagtccaag
atctctgccatgaaggaggaaagagagcagctgtcgaccgaacgccaggagcagatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctaaaggaacgtcagaagctgctggagaaaatcgaggagaag
caaaaagagctgcaggagaccgagcccaaattcaacatggtgaaggaaaaagaggagcgg
ggtatctccagattggcccaggctactcaggagaggacagacctgtacgccaagcaggga
cgtggcagccagttcacctccaaggaggagagggacaagtggattaagaaggagctgaag
tctctggaccaggccatcaatgataagaagaggcagatcgcagccatccacaaagacctg
gaagacacggagacgaataaggagaagaacctggaacagtacagtaaactcgatcaagat
ctaaatgaggtcaagacccgtgtggaggagctggacaaaaagtattatgaagtgaagaac
aggaaagatgagctgcagagcgaaagaaactacctgtggcgagaggagaacgcagagcag
caggccctggcagccaaacgcgaggatctggagaagaaacagcagctccttcgagcggcc
actggcaaggccattctgaacggcattgacagcatcaacaaagtccttgagcatttccgt
cggaaaggcatcaaccagcatgtcatcaatggttaccacggcatcgtcatgaataacttt
gagtgcgagcctgctttttatacctgtgtggaggtgactgctggtaccagactgttctac
cacattgtggagactgatgaagtcagcaccaaaatattgatggagttcaacaaaatgaac
ctgcctggagaagtcacattcctgcccttgaccaagctggacgtcagggacacagcctat
ccagagaccaatgacgccattcccatgatcagcaaactgcgttacagcaccaactttgac
aaggccttcaagcatgtgttcgggaagaccctgatttgtcgcagcatggaggtctccacc
cagctggccagggcattcaccatggattgtataactttggagggtgaccaggtgagccac
cgtggagcgctgaccggaggctactatgacaccagaaagtctcgcctggagctgcagaaa
gacatgaggaaggctgaggaggagttgggtgagctggaggccaaactcaatgagaacctg
cgcaggaacattgaacgcatcaacaacgagatcgaccaactgatgaaccaaatgcagcag
attgaaacacaacagagaaagttcaaggcctccagagacagtattctgtcagagatgaag
atgctgaaggagaagaggcagcagtcagagaaaacgttcatgcccaagcaacgcagtctc
cagagtctggaggccagtctccacgccatggagtccaccagggagtcactgaaggccgag
ctgggtacagatctgctttctcaactaagcctggaggaccagaggcgtgtcgatgacctc
aatgatgagatccgtcagctccagcaggacaacagacagttgttgaatgaaaggatcaaa
ctagagggcatcatgaccagagtggaaacctatctcaatgaaaacttacggaaacgtctt
gaccaagtggagcaggagctgaacgagctgcgagagactgagggaggcacagtgctcaca
gcaacaacatctgagctggatggcatcaataaacgtgtcaaagatactttgtctcgatca
gaagatctggataccctggttgacaagacagagggtgagatcaaggatcacataaagagc
atggatcgctggaagaacattgagaaggagcaaaacgacgccatcaaccacgacaccaag
gagctggagaaaatgaccaacaggcaaggcatgttgctcaagaagaaagaggagtgcatg
aagaagatcagagagctcggctcacttccacaagaggcctttgagaagtaccagaccctc
acactcaaacagttgttccgaaaactggagcagtgcaacacggagctgaagaagtacagc
catgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaagagaaactc
atcaagcgccaggatgagctggaccgcggccacaaatccatcatggagctcatgaacgtc
ctggagctgcgaaagtacgaggccatccagctcaccttcaaacaggtgtcgaagaacttc
agtgaggttttccagaagctggtgccgggtggcaaagctacactggtgatgaagaagggc
gacgctgaaggcagccagtcccaggatgagggcgagggcggtgcggacagcgagaggggc
tccggctcacagagcagcgttccctcagtcgaccagttcactggagtcggaatcagggtg
tcgttcacagggaagcagggcgagatgagggagatgcagcagctgtctggaggtcagaag
tctctggtggctctggctctgatatttgccatccagaagtgtgaccccgcccctttctac
ctgtttgatgagatcgaccaggcgcttgacgcccagcacaggaaggccgtgtcagacatg
atcgtggagctggcaggacacgcacagttcatcaccaccacgttcaggcctgagctgctc
gagtccgccgacaagttctacggtgttaagttcagaaacaaggtgagtcacattgatgtg
atcacagcggagcaggccaaagactttgtggaggacgacaccacccatggttaa
DBGET
integrated database retrieval system
