Scophthalmus maximus (turbot): 118313203
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Entry
118313203 CDS
T09850
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03008
Ribosome biogenesis in eukaryotes
smau03013
Nucleocytoplasmic transport
smau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118313203 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
118313203 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118313203 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118313203 (xpo1a)
03009 Ribosome biogenesis [BR:
smau03009
]
118313203 (xpo1a)
03016 Transfer RNA biogenesis [BR:
smau03016
]
118313203 (xpo1a)
03036 Chromosome and associated proteins [BR:
smau03036
]
118313203 (xpo1a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118313203 (xpo1a)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118313203 (xpo1a)
Pre-60S particles
118313203 (xpo1a)
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118313203 (xpo1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118313203 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
118313203
NCBI-ProteinID:
XP_035494429
LinkDB
All DBs
Position
8:complement(1151192..1163717)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFSQKLDITLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILEVVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
VFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRVAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRLNLRETLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPMLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHSQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKISQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
AEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERESSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagaaatgacaatgttggccgatcacccagccagacagctgctggacttcagt
cagaaactggacatcacgctgttggacaatgtcgtcaactccatgtaccacgacatcggg
tcccagcaacgcgtggcccaggaagtgttgaccaacttgaaggaccatccggatgcctgg
acgagggtcgacaccatcctggagttctctcagaacatgaaaaccaaatattacgctctg
cagattctggaggtcgtcatcaaaacacgctggaagattctcccaagaaatcagtgtgac
ggaatcaagaaatatgtggtcggtttgatcatcaaaacttcttcagatcctgcaaatatg
gagaaagagggcgtgtatatttcaaaactcaacatgatcctcgtccagatcctgaagcag
gagtggcccaaacactggcccacgttcatcagcgacatcgtgggcgcgagtcgcaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtcttcgac
ttctccagtggccagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcccaaatattccagctgtgccagtttgtgatggagaactcccagaacgccccg
ctggtccacgccacgcttgagacgctcctccgcttcctgaactggattcctctaggctac
gtcttcgagaccaaactcatcagtacgctggtctacaagttcttgaacgtgcccatgttt
cgcaacgtgacgctgaagtgtttgacggagatcgccggcgtgagcgtcaaccagtacgag
gagcagtttgtcaacctgttcactctcaccatgtgccagctcaaacagatgctgcctttg
aacaccaacatccgagtggcctactccaacggcaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagaacacggccagctcgtcgagaagagg
ctgaacctgcgagagacgctcatggaggcgctgcacttcatgctgctggtgtcggaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccacctggcggcagagctc
tacagggagagtcccttctcaacctccagcacgccgctcctgtccgacgtcccgccacga
agacacctctacctgcccatgctgtcccaggtccgtttgctgatggtgagccgcatggcc
aaaccagaggaggtgctggtggtggagaacgaccagggcgaggtggtccgggagttcatg
aaggacacggacgccatcaacctctacaagaacatgagggagactctcgtgtacctcact
cacctggactacgccgacacagagcgcatcatgacggagaagctccacagtcaggtgaac
ggcacagagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagt
ggggcgatgcacgaggaggacgagaagaggttcctggtcaccgtcatcaaggacctgctc
ggcctgtgtgagcagaagagaggtaaagacaacaaggccatcatagcgtccaacatcatg
tacatcgtgggacagtatcctcgcttcctgcgagcccactggaagttcctcaagaccgtc
gtcaacaagctgtttgagttcatgcacgaaactcatgacggcgtccaggacatggcgtgc
gacaccttcatcaagatctcccaaaagtgcagacgccattttgtccaggtgcaggtgggc
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgtgacctg
cagccgcagcaggtacacacgttctacgaggcggtgggctacatgatcggggctcagacc
gaccaggcggttcaggagcttctcatagagaagtacatgctgctgcccaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgccgagacggtg
cgtcagctgggcagcatccttaagacaaacgtccgtgcctgtaaagccgtcggtcatccc
ttcgtcgtccagctgggacggatctacctggacatgctcaacgtgtacaagtgtctgagt
gaaaacatttcctcggctgtccagacgaatggtgagatggtgaccaaacagcctctgatc
cggagcatgaggacggtcaagagggagaccttgaagctgatctcgggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaactttgttccccccctgctagaggccgtgctc
atcgactaccagaggaacgtcccggccgctcgcgagcccgaggtcctcagcaccatggcg
accatcgtcaacaagctggggggccacatcaccggggagatccccaagatcttcgacgcc
gtcttcgagtgcactctgaacatgatcaacaaggactttgaagaattcccggaacacaga
actcacttcttctacctccttcaagccgccacgtcccagtgcttcccggcgttcctgtcc
atcgccccggcccagttcaaactgatcctggactccatcatctgggccttcaagcacacc
atgaggaacgtggccgacacaggtctgcagatcctctacacgctgctgcagaacgtgtcg
gcggaggaggcggcggcgcagagcttctaccagacgtacttctgtgacgtgctgcagcac
attttctccgtggtcaccgacacctcgcacaccgcaggcctgaccatgcacgccaccatc
ctggcctacatgttcaacctggtggaggaaggcaaggtgagcgtggccctgagcgccgcc
agccccgccaacaaccaggcgcatgtccaggagtacatcgccaacctgctgaagacggcc
ttcccccacctgcaggacgcccaggtgaaggtgttcgtaacaggcctgttcagcctgaac
caggacatcccggccttcaaggagcacctgagggacttcctggtgcagatcaaggagttt
gccggcgaggacacaacggacctgttcctggaggagagggagtcgtctctgcgtcaggcc
caggaggagaagcacaagctccagatgtctgtgccgggaatcctcaacccccacgagctg
ccggaggagatgtgcgactga
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