Scophthalmus maximus (turbot): 118313422
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Entry
118313422 CDS
T09850
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03420
Nucleotide excision repair
smau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118313422 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
118313422 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118313422 (ercc8)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118313422 (ercc8)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118313422 (ercc8)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
118313422 (ercc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR55
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
NfeD1b_N
Motif
Other DBs
NCBI-GeneID:
118313422
NCBI-ProteinID:
XP_035494724
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All DBs
Position
19:10041341..10051079
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AA seq
401 aa
AA seq
DB search
MLGFLAARQAGLDDPLRLRRAESTRRVLGLELNPDRDVDRIHGNGINTIDIDAIEGRYML
SGGADGVIAIYDLENFSGKPQYTCKAVCTVGRSSQYVHKFSVETVQWYPYDTGMFVSSAF
DKTMKVWDTETLKPAEVFQFEDNVYSHHLSSIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVQWSPRYEHILASASADSKVKVWDVRRASGSLLTLDQHNGDKTKASSEA
VNTAHNGRVNGLCFTGDGLYILTAGTDDRMRLWNSATGENTLVNYGKVCNESRKKLQFTV
SRGCSPEFVFVPCGSSIAVYALHTGELVAMHRGHYNNVDCCEFHPDYQELYSGGKDGNIL
AWVPVLRASDVEEESNSSNKAAANQSSVNPAFQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctggggtttctggcagcgaggcaggctggactggacgacccgctgcgcctgcgacgt
gcagagtcgacgagacgggtcctcggtctggagttgaatcctgatcgagacgtggacaga
atccatggaaatggcatcaacaccattgacatagacgcaatagagggtagatacatgttg
tctggaggcgcagatggagtgatcgccatctatgacctggagaacttcagtgggaaacca
cagtacacctgcaaggcagtctgcacagtgggcaggtcgagccagtacgtccacaaattc
agtgtagagacagttcaatggtacccatacgacacaggcatgtttgtgtccagtgccttt
gataagaccatgaaggtctgggacactgagaccctgaagcctgctgaggtcttccagttt
gaggacaacgtctacagccaccacctatcctccatcgccaggaagcacagtctcattgca
gttggcaccaaaaaccctaaaatccagctgtgtgacctgaagtctggttcacggattcat
gttcttcagggtcacagagcagaggtcctgtctgtgcagtggtcacccagatacgagcac
atcttggcctctgccagtgcagacagcaaggtgaaagtgtgggatgtacgtcgggcttct
ggtagtctccttactctggaccagcacaacggagacaagacgaaagcctcctctgaagca
gtaaacacagcccataatgggagagtgaatggcctgtgcttcactggtgacggtctctac
atcctcacggccggaactgatgaccgtatgaggctatggaatagtgccactggggaaaac
acgctggtgaattatggaaaggtctgcaacgagagtcgtaaaaagcttcagttcactgtg
tcgcgtggctgcagcccagagtttgtgttcgtgccgtgcggcagctccatcgcagtgtac
gccctccacacgggagagttggtcgctatgcacaggggtcattacaacaatgtcgactgc
tgcgagttccatccagactaccaggagctgtatagcggcggtaaagacggtaacatcctg
gcatgggttcctgttctccgtgcctcagatgtggaagaagagtccaactcttcaaataag
gctgctgctaaccagtcttcggtgaaccctgcctttcaggatgcatggagcagtgatgaa
gattaa
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