Scophthalmus maximus (turbot): 118313698
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Entry
118313698 CDS
T09850
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03030
DNA replication
smau03410
Base excision repair
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118313698 (pole)
03410 Base excision repair
118313698 (pole)
03420 Nucleotide excision repair
118313698 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smau03032
]
118313698 (pole)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118313698 (pole)
Enzymes [BR:
smau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118313698 (pole)
DNA replication proteins [BR:
smau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
118313698 (pole)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
118313698 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
118313698
NCBI-ProteinID:
XP_035495291
LinkDB
All DBs
Position
19:13467730..13483873
Genome browser
AA seq
2293 aa
AA seq
DB search
MVFQNSGRFRAERGQGGGDPDNQDDGSSMSALKRLERSQFTDEMDSRFGFDRLKEPGEKT
GWLMNMHPAEILDEDKRMISAVDFYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SRKFQGKVSKLEILSKEDLDLPNHLVGLKRSYIKLAFNTVDDLIKVKREIAPAVRKNRER
EQSNDAYTSMLSSALSGGNVSSADEHRTSKNISDQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSTYPPEIVQRDDLVERPDPVVMAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTIFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFIETRASLHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEV
CDEIKAKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHNLNREEQAKHE
KKRLADYCKRAYKKVHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SSAQDSGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTGNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPASLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVSKVADYWLDVLYS
KAANMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVALQP
LEAGQAVDIEDFGMPARPLQPAILISTKRKRASQGDDSQVESQDVELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
TYRKVNRMLPRSNMVGYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
KLGCVCMVNKHVVRDLAGREADSFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLNNLYTAERTALLEKTTEDLLPPEKHNFEVRAEN
DAKAIYRALQRILLSYKEERRGPTLIAVQSNWELRRLASGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESEDRGSVEINAQGCYSTVCVEMDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAVASYDETALCSNTFRILKSMV
VGWVREITQFHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITSSIHTKEIFHSLSLSFSRCWEFLLWMDP
ANYGGVKGKLPSNVLYGEEGGKRKKSRRGEGDEDGSEDEDEANVEEDDGDGETDEVEELI
ESNWNIMQYLPQTASCQKYFLMTVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQASQQ
AVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLP
LNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSENAQFQDPCNSYILPEV
ICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCLAQYETESIEMALVEALQKKLMSYTL
QDLVCTKCKGVKEANMPLYCRCAGDFDLTFSAKSFSEQITVFRNIASHYNMSFLEETIDW
LLVMSPHVGQSIH
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttttccaaaacagtggaaggttcagagccgagcgaggacaaggcggaggagacccg
gacaaccaggacgatggctcctccatgtcggctctcaagcggctggagcgcagccagttc
accgacgagatggactcccgcttcggcttcgacaggttgaaggagccgggggagaagaca
ggctggctgatgaacatgcacccggctgagattctggatgaagacaagaggatgatcagt
gctgtggatttctatttcattcaggaggatggaagtaggttcaaggtggcgctccctttc
aagccatatttttacatagccactaaaaagaactgcgagagagaggtcatctcgtacttg
tcgaggaagttccaaggaaaggtgtcgaagcttgaaattctctcaaaagaggatctagac
ctgccaaaccatttggttggactgaagagaagctacatcaagctggcgttcaacaccgtg
gacgacctcatcaaagtgaagcgtgagatcgcccccgcggtgcgtaagaacagagagcgg
gagcagtccaacgatgcctacacgtcaatgttgtcaagtgccttgtctggtggaaacgtg
agctctgcagatgaacacaggacgtcaaagaacatttcagaccagctggacaacatagtg
gacatgagagagtacgacgtcccctatcacgtgcgagtgtcaattgacctcaagattcac
gtggctcactggtacaatgttcgatacagaggcagcacctacccaccagagatcgtacag
agagatgatcttgtggagcgaccagaccctgtagttatggcctttgacatcgagaccacc
aaactgccactgaagttcccagatgcagagacagaccagattatgatgatctcctacatg
atagacggacaggggtttctaataacaaacagagaaatcgtctctgagaacattgaggat
ttcgagttcactcccaaacctgaatacgaaggccctttcaccattttcaatgaggatgat
gaagcggccctcattcagaggtggttcgatcacgttcaagagaccaaaccaaacatcttt
gtgacatacaacggagacttctttgattggccttttattgagactcgggcttcactccat
ggactgagcatgcacagggagatcgggttccagaaggacaaccagggagagtacaagtcc
agtcaggccatccacatggactgcttacggtgggtaaaaagagacagctacctgccggtg
ggaagtcataatctgaaggcagcagcgaaggccaaactgggctacgaccctgtagagctg
gaccccgaggagatgtgccgcatggcaacagaggagccacagactttagcaacgtactct
gtgtcagatgctgtggccacatattacatgtacatgaaatatgttcatcccttcatcttc
gccctgtgtaccatcatccccatggagcctgatgaggtgctgcgtaaaggctctgggaca
ctgtgtgaggccttgctcatggtgcaagccttccacgccaacattgtcttccccaataag
caggagcaggtcttcaacaaactgacagacgacggccacgtcatggactcggagacctac
gtgggcggccacgtggaggcactggagtccggagtgtttcgcagtgacatcccctgccgc
tttaaaatgaacccagctgcattcgacttcctgctgcaaagagttgagagaacaatgcgt
cacgctattgaggaagaggagaaaatccccctggagcaagtcacaaacttcaatgaggtc
tgcgatgagatcaaggcaaagctgacttcgctgaaggaagttccaaacaggatcgaatgc
cccctcatctaccatctggacgtgggggctatgtaccccaacatcatcctcaccaaccgc
ctgcagccatcggctatggtcgatgaggccacttgtgctgcctgtgactttaacaagcct
ggagccacctgtcagagaaggatggcctggcaatggagaggagaaatcatgccggccagt
cgcagtgagtttcaccgtatccagcagcaactggagtcagagaagttcccgccgctgttc
cccaacggtccacctcgagcttttcacaacctcaacagagaggagcaagccaaacatgag
aagaaacgtttggcagactactgtaagagagcctacaagaaggtacacgtcaccaagctg
gaggaacgagtcaccaccatctgtcagagagaaaactccttttatgtcgacactgtgaga
gcgttcagagatcgacgttacgaattcaaaggactccacaaggtgtggaagaagaaactg
tcatcagctcaggacagtggagacgccgctgaggtgaagcgttgcaagaacatggagatc
ctgtacgactctcttcagctggctcacaaatgtatcctcaactcgttttatggctacgtc
atgaggaaaggggcacgctggtactccatggagatggctggcattgtgtgctacactgga
gccaacatcatcactcaagccagagagctgattgaacaaatagggagaccactggagctg
gacaccgatggtatctggtgtgtcctacccaacacctttcctgagaactttgtggtgaag
acgggtaatgagaagaagcccaaggtgaccatctcttacccgggggccatgctgaacatc
atggtgaaggagggatttaccaacgaccagtaccacgagctggtcgaccccgcgtccctc
acttacgagaccaggtcggagaacagcatcttcttcgaggtggacggaccgtacctggcg
atgatcctgcccgcctctaaagaggaagggaagaagctgaagaaaaggtatgctgtgttt
aatgaggatggttctcttgctgagctgaagggttttgaggtgaagagaagaggagagctc
cagctcattaagatttttcagtcctcggtgtttgaggctttcctcaaaggtaccactctg
gaggaggtgtacgcgtctgtgtccaaagtggctgactactggctggacgttctgtacagc
aaggctgccaacatgccagatgcggagctgtttgaactgatttcagagaatcgttcaatg
tccagaaggctggaggactacggagagcagaagtccacttctatcagcaccgccaagcga
ctcgctgagttcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaaccagagggttcgcctgtcacagagagagccattcctcttgccatcttc
caggcagagcccagtgtgaagaaacatttccttcgtaagtggctgaagatgcccagcctg
catgacttggacatccgctctatccttgactggagttactacatagagaggttgggtagt
gccattcagaaaatcatcaccatccctgcagctctgcaacaggtgaaaaacccagtgccc
agagtgaggcatcccgactggcttcacaagaaacttctggagaaaaatgacatttacaag
caaaagaaaattagtgaactattcaccagtgaaggcaagagacaggtggcccttcagcct
ctcgaagcaggccaagctgtggacatagaggactttgggatgccggccagacctctgcag
ccggccatcctcatcagtaccaagcggaagcgagcctctcagggagacgacagccaggtg
gagtctcaggacgtcgagctcacccagtcctggagagagatcctgggtccgcccccacct
atgggaaagacacgggaggagcgtctcgtgtggctgcgctaccataagaaaaagtgggag
ctgcagctgaggcagaggaaggagaggaagaagaggaggaggctgctagacggtgaagcg
cagcctgttggtggaggagtcatcagagatggcccaaccaccggcctggggagcttcctc
cgcagaacggcacgcagcatcctggacatgccatggcaaattgtgcagattgcagagacg
agtcaccctggtctgtacaagttgtgggctgtgatcggaaacgacctccactgcatgaag
ctcaacatcccccgtgtcttctatgtcaatcagaaagtccccaaacaagaggagggagca
acatacagaaaggtgaatcgcatgctgcctcgctccaacatggtgggctacctttatgag
tactgtgtaccagaggacatgtaccaggagcacatcaatgagatcaacgctgacctctcc
gcaccagacatcgaaggagtctatgaaacacaggttcccttgctgtttcgtgcactggtg
aagcttggatgtgtgtgtatggtcaataaacatgttgtgagggatctggccggcagggag
gccgattcttttgacctggagcatctggagatgaggtctctggcccagttcagctacctg
gaaccagggagtgttcgccacatgtacttgtaccatcacagccagggtcacaaggctctg
ttcggcctgttcatcccctctcagcgcaaagccagcatctttgtcttggacacagttcga
agcaaccagatgcccaacctgaacaacctttacacagctgaacgcactgccctcctggag
aagactacagaggatcttctgcctccagagaaacacaactttgaggtccgagctgaaaac
gatgcaaaggccatctaccgcgcactgcagcgcattctgctcagctacaaggaggagcgt
cgtggacccacccttatcgcggtgcagtcaaactgggagttgcgtcgtttggcgtcggga
atgccggtgcttgaggagttcccggtcgttccagtacatgtggtggatgagatcagttat
aacgtgctggactggcaacggcacggtgcccggcgcatgatccgccactacctcaacctg
gacagctgcctgtcgcaggcttttgacatggccaggtattaccacttacctgtggggaac
ttgcctcaggatgtgtccatctttggttcagacttgttcctggcaagacatctacgaaag
cacaaccacctgctgtggctttcacccacagccagacccgatctcgggggaaaagaggct
gatgacagccgtctggtcatggaaagcgaggacaggggctctgtggagatcaacgctcaa
ggatgctattccacagtgtgtgtggagatggacctgcagagcctggcagtgaacaccatc
ctccagtcgcagcatgtcaatgacatggaggggggagccagtctgggcgtcagttttgat
gtgatccagcaggcctcgttggaggacatgatgtctgggaatcagggagcaagcgctgtc
gctagttatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtg
gtgggatgggtcagggagatcactcagttccacaatgtgtacgcagacaaccaggtgatg
cacttctaccgctggctgcgctccccgagctctctgctctacgaccccgcacttcaccgc
accctgcacaacatgatgaagaaggtttttctacagttggttgcagagttcaaacgtctc
ggctcaactgtggtgtatggaaacttcaacaggatcatcctgtgtactaaaaaacggagg
atagatgatgcgatcggctacgtggaatatatcaccagcagcatccacaccaaagaaatc
ttccactccttgtccttgtccttctctcgatgctgggagttcctgctgtggatggacccg
gccaactacggtggcgtgaaggggaaactgccctccaacgtcttgtatggagaggaagga
ggcaaaaggaagaaaagtagacgaggggagggtgatgaggatggcagcgaggatgaggat
gaagcgaatgttgaggaagatgacggtgatggagagacagatgaggtggaggagctgatt
gaaagcaactggaatatcatgcagtatctgccccaaacagcctcatgtcaaaaatacttc
ctcatgactgtctcagcctacattgcagcagtctaccacagtatgaaagaggagctgaga
cgaaatgctcctggagcaacaccagtcaagagacgaggaggcagccaggcttcccagcag
gcagtgggagacctaagtgctcttcctggaatgatctccttctcccaggaatacgtgtcc
agtgagctgacacagaactttttcaccatcactcaaaaaatccagaagaaggtgacgggt
accaggagtgtgacccaaccttcagagatgttccctgtcctgcctggatcccacctgcca
ctcaacaacccagcactggagtttattaaatatgtctgccaggtcctctcactagacgcc
aacatagtgaaccaggtgaacaagctgaagagagacctcctgcgtctcgtggacgttggt
gagttttcagagaatgcccagttccaggatccatgtaactcctacatcctgccagaagtc
atctgccaccactgcaatttttgccgtgacctcgacctctgcaaggacccttctgttgcg
caggacgggtctgtcttgcctcagtggttctgctccaactgcctggcccagtacgagact
gagtctattgagatggctctggtagaggccctgcagaagaagctgatgagctacacactg
caggacctggtgtgtaccaaatgtaaaggcgtgaaggaagcgaacatgcctctctactgc
agatgtgccggcgactttgacctcaccttctcggccaagagcttctctgagcagatcacg
gtgtttcggaacatagcgtcccactacaacatgagcttcctggaggagaccattgactgg
ctgcttgtgatgagtccacacgtcggacagagcattcactga
DBGET
integrated database retrieval system
