Scophthalmus maximus (turbot): 118313705
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Entry
118313705 CDS
T09850
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118313705 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
118313705 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118313705 (thoc5)
03041 Spliceosome [BR:
smau03041
]
118313705 (thoc5)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118313705 (thoc5)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118313705 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
118313705
NCBI-ProteinID:
XP_035495305
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All DBs
Position
19:13710627..13718154
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AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSEAGTPEMKRGRGDGDQPDARVYNEEVELDGRSPEQDYLQYKESC
ETLATLMSEIQELKSNGAKEGSAEVEQRRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHDA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVPEEEFYQGAPQEISRPHLT
KNDPHQLTLARLDWELEQRKGLAEKYKESLATKEKIHKSIEVKKEHLTSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLTVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTTTDLSAAISAGDLLKSDTLLSCLYSSDQGRETPNPAN
RYQFDKVGIVCFADYVEELGHPYMWVQNLGGLHFPSDASESVRVGSSLSASHMESTMKLL
RGRLQSRLALHKQFASLEHSIIPVSAESQHLFPAKILSRLARWTTIAHQEYMDLPYTRHV
TEAGLAKETGLYFMTVVERGTARLQAAVVMSPRYPEVSPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDGVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacgccctgaagaagcgaaagtcaaaggttctccgcagtgaagcaggcact
ccagagatgaagcggggtcgcggggatggggaccagccggatgcacgtgtgtacaatgag
gaggtggagctggatggtaggagccctgagcaagactatctgcagtacaaagagtcatgt
gagactttggccaccctcatgagtgagatccaggagcttaaatccaatggggccaaggag
gggagtgccgaggtcgagcagagacgtatgcagagctgcatccacttcatgaatctgaaa
aaactcaatcgtctagctcatatgcgactcaagagaggcagagaccaaacacacgatgca
aagcagagagtggatgtgctgcaccttcagttacaaaacctgctctatgaagtgatgcat
cttcagaaggagatcagcaagtgtttagagttcaagtctaagcatgaggagatagacttg
gtgcctgaggaggagttttaccagggggctccgcaggagatttccaggccccacctcaca
aagaatgacccccaccaactcactcttgctcgactggactgggagcttgaacagagaaag
gggttggcagagaaatacaaggagtcactggccacaaaggagaagatccacaagagcatt
gaggtgaagaaggaacatctgacaagcttacagcctggactgaatgccatcatgcaggcc
tctcttccagtgcaggagtatctgtccatgccttttgaacagactcagaaacagactgag
atcgcccgccacctccctccacctctgtatgtcctgtttgttcaagccaatgcctacggt
caggcctgcgacaagaacctgacagtgtcaatcagtggagatgtggatgaggccaaggcc
ttgtccaaacctccagaagattcccaggatgacgagagtgattcagatgcagaggaggag
caagagaaaacgaagaggcgaaggccaaccacgggcggccagttggatgacaaaagacga
gagatgctgaagaggcaccctctgtccctctgcttagacctcaagtgtaaagatggcagc
atcctccacctctacttctactacctgatgaatctgaacatcatgacggtcaagaccaag
gtctccaccacgacagaccttagcgccgccatcagtgcaggtgatttgctgaagtcagac
actctgctcagctgtctctactccagcgatcagggacgggaaacacccaacccagcaaat
cgctaccagtttgataaagtcgggattgtttgctttgctgattatgtggaggagctgggt
catccctacatgtgggttcagaatctcggtggactgcattttcccagcgatgcttcagag
agtgtacgtgtgggcagctcactgagtgccagccacatggagagcaccatgaagctgctg
aggggtcgactccagtcccgcttggctttgcacaaacaatttgcctctttagagcacagc
atcatcccagtctccgctgagagtcagcacctgtttcctgccaagatcctctcccgtttg
gctcgctggaccacaatcgctcaccaggagtacatggatttgccgtacacacgtcatgtg
actgaggctgggctggcgaaggagactggtctgtactttatgaccgtggttgaaagaggc
acagctcgtcttcaggcggcagtagtgatgagtccccgttatccagaggtctctcctcta
ttctctctctctctcagctggaagggagagcgcagcggacgcacggatgacaaccttcga
gccatggagagtgaggtcaatgtgttcaaaaatgaactgcagggaccacgtccaggacac
cagctcctaaccaatcagatttcacgcctgtgcgtctgcctggatgtgtatctggagact
gaggggcaagatgacggcgtggagggaccgcgagagttcccccgtgaaaagatgtgcctg
cgcactgtcaggggtccaaatcgtctgaagccgttcaagtacaaccatcctcagggcttc
ttcagtcaccgctaa
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integrated database retrieval system
