KEGG   Scophthalmus maximus (turbot): 118313736
Entry
118313736         CDS       T09850                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X2
  KO
K12825  splicing factor 3A subunit 1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118313736 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smau03041]
    118313736 (sf3a1)
Spliceosome [BR:smau03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118313736 (sf3a1)
 Complex B
    118313736 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    118313736 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2 Phage_p2_ORF12
Other DBs
NCBI-GeneID: 118313736
NCBI-ProteinID: XP_035495372
LinkDB
Position
19:complement(18369037..18375630)
AA seq 778 aa
MPPGPVQIIQPDSNNKNEAPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKALEPSAAVPKVMLQAMQQSQQLTQ
KAQVIQETVIPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKKEAENPREVMEQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQE
RYEKYGESEEVEMEVESEDEDDERDNRNNGQPSQPDQDTQVQDMDEGSDEDDDGMKAPLP
PDNPMPPPLPPTPDQVIIRKDYDPKASKPQTSVAVPDEYLISPITGEKIQASKMQEHMRI
GLLDPRWLEQRDRIIKDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPH
EIHHHPPIPSSAANMPKPSPPITSVPRLPSSMAPPVRTTLLSAVPVIPRPPVVRISPGQV
LTPMPPMLSAPRINVVPMPPTAPHIMAPRPPPMVVPTFVPAPPVPQPPSAPAPPSHPPPP
HEDEPMSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPLTD
QVSVIKVKIHEATGMAAGKQKLQYEGIFIKDSNSLAYYNMNNGSIIHLALKERGGRKK
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcagatcatccagccggattccaacaataagaatgaagcacca
gcagaagaaaccccagccactaaacccattgttggtatcatatatccacctcctgaggtt
cgaaacattgttgacaagacagccagctttgttgccaggaatgggcctgagtttgaagca
agaattcgtcaaaatgagatcaacaatcccaaattcaatttcctcaatccaaatgacccc
taccatgcatactaccgtcacaaggtcaatgaattcaaggagggaaaagcgctggaacca
tctgcagcagtgcctaaggttatgctgcaggccatgcagcagtcccagcagcttacgcaa
aaagcacaggtgattcaggagacagtgattcctaaagaaccacctccggagtttgagttt
attgctgatcctccgtcaatctccgcatttgacctggatgttgtcaagctcactgcccag
tttgttgctcgcaatggccgccagtttctcactcagctcatgcagaaagaacagaggaac
taccagtttgactttctgcgacctcagcacagtcttttcaactacttcaccaaactggtg
gagcagtacactaagatactgatccctcctaaaggcctcctgaccaagctgaagaaagag
gctgagaatccacgagaggtcatggaacaggtaaggtaccgtgttgagtgggcaaagttc
caggagcgcgagagaaagaaagaggaggaggaaagagagaaagaacgggtggcatatgcc
caaattgactggcatgactttgtagtggtagaaacagtggatttccagcccaacgaacaa
ggccacttccccccacccaccacacccgaggagcttggcgctcgcattctaatccaggag
cgctacgagaagtatggagagagtgaggaggtggagatggaggttgaaagtgaggatgaa
gatgatgaacgggacaaccggaacaatggccagccctcacaacctgatcaagacacacaa
gttcaggacatggacgagggatctgatgaagacgatgatggcatgaaggctccactgcca
ccggacaaccctatgccacccccactgcccccaactccagaccaggttattattcgcaaa
gattatgaccccaaagcttccaagcctcagacctcagttgcagttccggatgagtacctc
atctcaccaattactggtgagaagattcaagccagtaagatgcaagagcacatgcgtatt
ggtctgctggatccgcgctggctggagcaaagagaccgcattatcaaagacaggcagacc
gaggatgaagtctatgctcctggtttggatattgagagcagcctgaaacagctggctgag
aggcgtactgatatcttcggtgtggaagagacagccatcggaaagaagatcggtgaagaa
gaaatccagaagccagaggagaaggttacctgggatggccactctggaagcatggctcgc
acccagcaggcagcacaggccaacatcaccctgcaagagcagatcgaagccattcacaag
gccaaaggactggttggagaggatgacacaaaggagaaaattggcccaagcaagcctcat
gaaattcatcaccaccctccaattccctcctctgcagccaatatgcctaaacccagtcct
cctatcacttcagtgcctcgcctaccctcctctatggcacctccagtgcgcaccacgctc
ctgtctgcggtacctgtaattccaagacctcccgtggtgcgcatttcaccaggacaagtt
ctaacaccaatgcctcccatgttatctgctccacgtattaatgtggtccccatgccgcca
acagcaccccacatcatggccccgaggccaccccccatggttgttccaacatttgtccca
gctcctccagtacctcaaccaccatctgctcctgcaccaccttcccacccacccccacct
catgaggatgagccaatgagcaagaagatgaagacggaggacaaccttattccagaggag
gagttccttcgcagaaataagggtcctgtggcagttaaagtacaggtccccaacatgcag
gacaagactgaatggaagttaaatggccaagtgctgaatttcactgtgccgctcacagac
caggtgtctgttattaaagtcaaaatccatgaagcgacaggcatggcagcaggaaaacag
aagttacaatatgagggcattttcatcaaggattcaaactctcttgcttattacaacatg
aacaacggttccatcattcacttggcgctgaaggagagaggtggaagaaagaagtga

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