Scophthalmus maximus (turbot): 118313766
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Entry
118313766 CDS
T09850
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118313766 (gapvd1)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118313766 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
118313766
NCBI-ProteinID:
XP_035495445
LinkDB
All DBs
Position
19:18499234..18531114
Genome browser
AA seq
1477 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVSSEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVTHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYQQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADGDADPR
RKSGLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVVYITHNQLLALVDFVR
NVTAGDHLREEEHMALENLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIA
ARSRSRTNIAQEGEAEASSQESLHELMPEEVLVISLGTGLQTVPGMMSENEVLNLQMAEG
AQGEGHADETKQHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGP
SGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSD
FDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPYGSTISETTSEAWSVEVLPSDS
EAQDLKQEERLQELESCSGVGSTSDDTEVREVSSRPSTPGLSVVSGISATSEDIPNKIED
LRSECSSDFGGKDSVTSPDGEESGHGAHHLTSPPSQADSLLAMFDPLSSGEGSSTGTIVR
PKVHYARPAHPPPDPPIPEASALGQETRHSLFIPHCLAQAELEHTKQRHSFPDRLVRSRS
SDIVCPGRRPTSDPGLNRRVAVEERDPAGAFALGPSSSPSKDSLKGEAEDRKDSDDEKSD
RNRPWWKKRFVSAIPKAPIAAFRKRDKQEKDDITQERTPQDDPLPRQSSQAQAAEDILDK
YRNIKRPSPSDGATAGASYDGAGGQKTKRSMCILHTLALHKVKGFSLCMCCFKDLCVEDG
AHDSPREDTLQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVALPIMAPA
TTRNGLPDHMDPEENEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLA
AITEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHM
ESKMLDFIKAFQACTASDDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSV
MNRIFKLAFYPNQDGDSLRDQLFHEHIQRLSKVVTATHKALQIPEVYLKEAPWPSAQSEI
RTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLST
VQYINNFYASRLSGEECYWWMQFTAALEFIKTIDDRK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacttgaagcaggagcggctgtatgtg
tcgtcagagaagcagctcatccagaggctcaacagtgatgtgctgaaaacagctgagagg
ctgtaccgggccgcatggatcgccaagcagcagaggatcaacctcgatcgtctcattctc
accagtgcggaggcctctccagctgaatgctgccaacatgccaaaatgctggaagataca
cagtttgttgatggctacaagacactgggcttccaggagaccatctatggagagtttttg
gcccggttgagggagaatcccagactggttgcttcctgtctggtggcaggagagaggctg
aaccaggagcacacccagggggtcacccatacagtcttcacctcactttatggcaactgt
attatgcaggaggacgagagctatttgcttcaggtgttgcggtacctgatagagtttgag
ctgaaggagagtgacaaccctcgccgtctgctgcgacggggaacctgcgccttcagcatc
cttttcaagctcttctccgagggcctgtactcagccaagctcttcctcactgccaccctg
cacgaacccattatgcagctgctggtggaagatgaagaccacctagagacggacccagcc
aaggtcacggagcgcctcactccggctcagcaggaacgctttggagagaagggctctgag
ggctaccaacaaagggtgcaggcagctgtggaggccaatgaagccaagctggtggctctg
gtcaacaaattcattggttacttgaagcagaacacctactgcttcccccacagcctgcgc
tggattgtgtcccagatgtacaagacgttgtcatgtgtggagcgtcttgaggtaggcgag
gtgcgcaccatgtgtacagacctgctgctgacctgcttcatctgtccagctatagtcaac
ccggagcagtatggtatcatctctgatgcccccatcaatgaagttgcccgcttcaatcta
atgcaggtggggcaacttttgcagcagttggccatggctgatggtgatgcagacccaagg
cggaagagcggtttgtctaaatttgataagagttgtgttgctgcctttctggatgtggta
attggaggaagagcagtcgagaccccacccatgtcctcgatgaaccttctagaaggcctc
agcaggactgtggtctatataacacataatcagctgctagcattggtggactttgtgcgc
aatgtgactgcaggggaccacctccgggaggaggagcacatggccctggagaacctgctg
gccaatgtgccccagtctcggactgtgaagagcaatagtctggagctgactccctccaac
accccccagctctcgccggctaccactcctgccaacaagaagaacaggctgcccatagct
gctcgtagccgcagccgtaccaatattgcccaggagggggaggcagaggccagctcccaa
gagtccctacatgagctgatgccagaggaggtgctggtgatttcactaggaactggtctt
cagactgtcccagggatgatgtcagagaatgaggttttgaacctgcagatggctgagggg
gcccagggggagggccatgctgatgagaccaaacagcatggcaaaccggacaaaaccttg
cgcttttccctctgcagtgacaacttggaaggaatctcagagggtccatccaatcgttca
aactctgtgtcgtctctggatctggagggagagtctgtttctgagcttggagctggacca
tcagggagcaatggggtggaggctttacagcttctggagcatgaacaggccaccactcag
gacaacttggatgacaaactccgcaagtttgagatcagagacatgatgggtctcacagat
gatcgggacatctccgagacagttagtgaaacctggagcaccgacgtgcttggcagtgac
tttgaccccaacatggatgaagatcggctgcaggagatagcaggggcagctgcagagaac
atgcttggcagcctgctgtgtcttcctggctcaggttcagtgttgctggacccctatggc
tccaccatctccgagaccacaagcgaggcctggagcgtggaggtcctgcccagcgactca
gaggcccaagatctgaagcaggaggagcgtctgcaggagctggagagctgctcaggggtc
ggcagcacctcggatgacacagaggtccgagaggtcagctcgagacccagcacaccaggc
ctaagcgttgtctcaggtatcagcgcaacctcagaagatatccccaacaagatcgaggac
ctgcggtcagagtgcagctcggactttggagggaaggactctgtgaccagtccagatggg
gaggagtcaggccacggagcacaccatctgacatctccaccctcacaggccgattccttg
ctggccatgttcgatcccctctcctctggtgaaggctcctccactggaacaatagtgagg
cccaaagtgcactatgcccgtcccgctcaccctccaccggacccgcccatccctgaagcc
agtgccctggggcaagagacacgccactctctcttcataccccactgcctggcccaggct
gagctggagcacaccaagcagcgccactccttccctgacaggctggtccgcagccgcagc
tctgacattgtttgcccaggccgccggcccacaagtgaccccggtcttaaccggcgggta
gcagttgaagagcgtgaccctgctggggccttcgccttaggaccctcctcgtcccccagc
aaggactccttgaaaggagaggctgaggacaggaaagacagtgacgacgagaagtctgat
cgcaacagaccctggtggaagaaacgttttgtgtctgccattcccaaagctccaatagcc
gcatttaggaaaagggacaaacaagagaaagatgacatcacccaggagcgtactccacaa
gatgacccattgcccagacagagcagtcaagcgcaggcagctgaagacatcctggacaag
tacaggaacatcaagaggcccagcccaagtgatggagccacggccggagcttcctatgat
ggtgcaggaggtcagaaaacaaaacgcagcatgtgcattttgcacacacttgctttacac
aaggttaaggggttttcactttgtatgtgttgtttcaaagatctttgtgttgaagacggc
gcacatgactctccgagagaagatactctgcagaacatttccacagacgacctcccagac
tcggccagccagacggcacagcagcatgactcaaagttctccttcagtgatgctaagaag
aagttgaggttagcgttgtgttctgcggactcagtggctctgcccatcatggctcctgcg
accacacggaatgggctgcctgaccacatggatcctgaagaaaatgagattgtctgcttc
ctgaaggtccagctcgcagaagccatcaacctccaggataagaaccagatggcccaaatc
caggagaccacgcgctgtgtcagccgcttcgatgcacgcacctgtagaaagctgctagct
gccattacagaggactacagaaagcgggcaccatacatagcttatctaaccaggtgtcgt
cagggcctgcagacctctcaggcccatctggagcggctcctccagagggtgctgagagat
aaggaggttgcaaaccgctacttcaccactgtctgtgttcgactcctccttgaacacatg
gaatccaagatgcttgactttattaaggcgttccaggcttgcacagcatcagacgacaag
acggcagcagtggaggattttctgcgctacttgtacggtgctatggcccgtgatgccatt
tggcagtatgcaagcgaggaccagctgcaggatgcccagatggctatcgagcgcagcgtt
atgaaccgcatcttcaaactggctttctaccccaaccaggacggagatagtctcagagac
cagcttttccatgaacacatccagcggctctcaaaagttgtgacggccactcacaaagca
cttcaaatcccagaggtctacttgaaggaggctccctggccctcggcacagtccgagatc
aggaccatcaatgcatacaagacgccacgagacaaagtccagtgtatcctgcgcatgtgt
tccaccatcatgaaccttctcagtctggcaaatgaagactccgtccctggagcggatgac
tttgtccctgtactcgtctttgtactcataagggcaaacccgccctgcctgctgtccacc
gttcagtacatcaataatttctacgccagccggctgagtggggaggagtgctattggtgg
atgcagttcaccgcggcgttggaattcattaagaccatcgacgatcgcaagtga
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